T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 79988..108457
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGD48_RS27470 (PGD48_27465) | 76036..76416 | + | 381 | WP_020802391 | hypothetical protein | - |
| PGD48_RS27475 (PGD48_27470) | 76483..76830 | + | 348 | WP_032445771 | hypothetical protein | - |
| PGD48_RS27480 (PGD48_27475) | 76925..77071 | + | 147 | WP_004152750 | hypothetical protein | - |
| PGD48_RS27485 (PGD48_27480) | 77122..77955 | + | 834 | WP_032445769 | N-6 DNA methylase | - |
| PGD48_RS27490 (PGD48_27485) | 78772..79593 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| PGD48_RS27495 (PGD48_27490) | 79626..79955 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| PGD48_RS27500 (PGD48_27495) | 79988..80473 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| PGD48_RS27505 (PGD48_27500) | 80905..81297 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PGD48_RS27510 (PGD48_27505) | 81527..82228 | + | 702 | WP_040120380 | hypothetical protein | - |
| PGD48_RS27515 (PGD48_27510) | 82314..82514 | + | 201 | WP_046664192 | TraY domain-containing protein | - |
| PGD48_RS27520 (PGD48_27515) | 82582..82950 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| PGD48_RS27525 (PGD48_27520) | 82964..83269 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| PGD48_RS27530 (PGD48_27525) | 83289..83855 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| PGD48_RS27535 (PGD48_27530) | 83842..84582 | + | 741 | WP_040120379 | type-F conjugative transfer system secretin TraK | traK |
| PGD48_RS27540 (PGD48_27535) | 84582..86006 | + | 1425 | WP_040120378 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PGD48_RS27545 (PGD48_27540) | 86078..86662 | + | 585 | WP_040120377 | type IV conjugative transfer system lipoprotein TraV | traV |
| PGD48_RS27550 (PGD48_27545) | 86985..87203 | + | 219 | WP_004195468 | hypothetical protein | - |
| PGD48_RS27555 (PGD48_27550) | 87204..87515 | + | 312 | WP_029497417 | hypothetical protein | - |
| PGD48_RS27560 (PGD48_27555) | 87582..87986 | + | 405 | WP_004197817 | hypothetical protein | - |
| PGD48_RS27565 (PGD48_27560) | 88029..88181 | + | 153 | WP_224518895 | hypothetical protein | - |
| PGD48_RS27570 (PGD48_27565) | 88363..88761 | + | 399 | WP_023179972 | hypothetical protein | - |
| PGD48_RS27575 (PGD48_27570) | 88833..91472 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| PGD48_RS27580 (PGD48_27575) | 91472..91861 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| PGD48_RS27585 (PGD48_27580) | 91861..92496 | + | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| PGD48_RS27590 (PGD48_27585) | 92531..92932 | + | 402 | WP_040120376 | hypothetical protein | - |
| PGD48_RS27595 (PGD48_27590) | 92929..93918 | + | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| PGD48_RS27600 (PGD48_27595) | 93931..94569 | + | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PGD48_RS27605 (PGD48_27600) | 94628..96583 | + | 1956 | WP_040120375 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PGD48_RS27610 (PGD48_27605) | 96615..96869 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| PGD48_RS27615 (PGD48_27610) | 96847..97095 | + | 249 | WP_004152675 | hypothetical protein | - |
| PGD48_RS27620 (PGD48_27615) | 97108..97434 | + | 327 | WP_004144402 | hypothetical protein | - |
| PGD48_RS27625 (PGD48_27620) | 97455..98207 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PGD48_RS27630 (PGD48_27625) | 98218..98457 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PGD48_RS27635 (PGD48_27630) | 98429..98986 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PGD48_RS27640 (PGD48_27635) | 99032..99475 | + | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| PGD48_RS27645 (PGD48_27640) | 99453..100832 | + | 1380 | WP_072198320 | conjugal transfer pilus assembly protein TraH | traH |
| PGD48_RS27650 (PGD48_27645) | 100832..103681 | + | 2850 | WP_040120373 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PGD48_RS27655 (PGD48_27650) | 103687..104214 | + | 528 | WP_040120388 | conjugal transfer protein TraS | - |
| PGD48_RS27660 (PGD48_27655) | 104403..105134 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| PGD48_RS27665 (PGD48_27660) | 105327..106016 | + | 690 | WP_072198322 | hypothetical protein | - |
| PGD48_RS27670 (PGD48_27665) | 106145..108457 | + | 2313 | WP_040120372 | type IV conjugative transfer system coupling protein TraD | virb4 |