T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 106763..139689
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP43_RS00555 (BGAOJDKN_00123) | 102514..102948 | + | 435 | WP_000845950 | conjugation system SOS inhibitor PsiB | - |
| PUP43_RS00560 (BGAOJDKN_00124) | 102945..103664 | + | 720 | WP_074524782 | plasmid SOS inhibition protein A | - |
| PUP43_RS00565 (BGAOJDKN_00125) | 103661..103975 | + | 315 | WP_000872086 | hypothetical protein | - |
| PUP43_RS00570 | 104165..104278 | + | 114 | Protein_114 | DUF5431 family protein | - |
| PUP43_RS00575 | 104223..104345 | + | 123 | WP_223163518 | Hok/Gef family protein | - |
| PUP43_RS00580 | 104644..104941 | - | 298 | Protein_116 | hypothetical protein | - |
| PUP43_RS00585 (BGAOJDKN_00127) | 105238..105534 | + | 297 | WP_001272251 | hypothetical protein | - |
| PUP43_RS00590 (BGAOJDKN_00128) | 105645..106466 | + | 822 | WP_032257143 | DUF932 domain-containing protein | - |
| PUP43_RS00595 (BGAOJDKN_00129) | 106763..107365 | - | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | virB1 |
| PUP43_RS00600 (BGAOJDKN_00130) | 107688..108071 | + | 384 | WP_000124827 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PUP43_RS00605 (BGAOJDKN_00131) | 108262..108915 | + | 654 | WP_016241851 | hypothetical protein | - |
| PUP43_RS00610 (BGAOJDKN_00132) | 109040..109267 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| PUP43_RS00615 (BGAOJDKN_00133) | 109300..109665 | + | 366 | WP_001099002 | type IV conjugative transfer system pilin TraA | - |
| PUP43_RS00620 (BGAOJDKN_00134) | 109680..109991 | + | 312 | WP_000012116 | type IV conjugative transfer system protein TraL | traL |
| PUP43_RS00625 (BGAOJDKN_00135) | 110013..110579 | + | 567 | WP_000399801 | type IV conjugative transfer system protein TraE | traE |
| PUP43_RS00630 (BGAOJDKN_00136) | 110566..111294 | + | 729 | WP_001230776 | type-F conjugative transfer system secretin TraK | traK |
| PUP43_RS00635 (BGAOJDKN_00137) | 111294..112745 | + | 1452 | WP_074512573 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PUP43_RS00640 (BGAOJDKN_00138) | 112735..113301 | + | 567 | WP_044715774 | conjugal transfer pilus-stabilizing protein TraP | - |
| PUP43_RS00645 (BGAOJDKN_00139) | 113288..113608 | + | 321 | WP_001057295 | conjugal transfer protein TrbD | virb4 |
| PUP43_RS00650 (BGAOJDKN_00140) | 113601..113852 | + | 252 | WP_001038347 | conjugal transfer protein TrbG | - |
| PUP43_RS00655 (BGAOJDKN_00141) | 113849..114364 | + | 516 | WP_000809905 | type IV conjugative transfer system lipoprotein TraV | traV |
| PUP43_RS00660 (BGAOJDKN_00142) | 114499..114720 | + | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| PUP43_RS00665 (BGAOJDKN_00143) | 114713..114847 | + | 135 | WP_265327905 | hypothetical protein | - |
| PUP43_RS00670 (BGAOJDKN_00144) | 114874..116445 | - | 1572 | WP_000381395 | IS66-like element ISCro1 family transposase | - |
| PUP43_RS00675 (BGAOJDKN_00145) | 116465..116812 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| PUP43_RS00680 (BGAOJDKN_00146) | 116812..117489 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| PUP43_RS00685 | 117543..117779 | + | 237 | Protein_137 | hypothetical protein | - |
| PUP43_RS00690 (BGAOJDKN_00147) | 117838..120468 | + | 2631 | WP_000069762 | type IV secretion system protein TraC | virb4 |
| PUP43_RS00695 (BGAOJDKN_00148) | 120465..120851 | + | 387 | WP_074512566 | type-F conjugative transfer system protein TrbI | - |
| PUP43_RS00700 (BGAOJDKN_00149) | 120848..121480 | + | 633 | WP_001297504 | type-F conjugative transfer system protein TraW | traW |
| PUP43_RS00705 (BGAOJDKN_00150) | 121477..122469 | + | 993 | WP_074524496 | conjugal transfer pilus assembly protein TraU | traU |
| PUP43_RS00710 (BGAOJDKN_00151) | 122483..123025 | + | 543 | WP_074512604 | hypothetical protein | - |
| PUP43_RS00715 (BGAOJDKN_00152) | 123028..123558 | - | 531 | WP_272954718 | hypothetical protein | - |
| PUP43_RS00720 (BGAOJDKN_00153) | 123754..124200 | + | 447 | WP_001510296 | hypothetical protein | - |
| PUP43_RS00725 | 124200..124352 | + | 153 | Protein_145 | TraU family protein | - |
| PUP43_RS00730 (BGAOJDKN_00154) | 124378..124842 | + | 465 | WP_001399772 | hypothetical protein | - |
| PUP43_RS00735 (BGAOJDKN_00155) | 125024..125542 | + | 519 | WP_000009087 | hypothetical protein | - |
| PUP43_RS00740 | 125569..125658 | + | 90 | Protein_148 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PUP43_RS00745 (BGAOJDKN_00156) | 125750..125929 | + | 180 | WP_097377525 | hypothetical protein | - |
| PUP43_RS00750 (BGAOJDKN_00157) | 126304..126942 | + | 639 | WP_032256597 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PUP43_RS00755 (BGAOJDKN_00158) | 126939..128747 | + | 1809 | WP_032256595 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PUP43_RS00760 (BGAOJDKN_00159) | 128774..129034 | + | 261 | WP_000864333 | conjugal transfer protein TrbE | - |
| PUP43_RS00765 (BGAOJDKN_00160) | 129027..129770 | + | 744 | WP_074526448 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PUP43_RS00770 (BGAOJDKN_00161) | 129940..130176 | + | 237 | WP_001346259 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PUP43_RS00775 (BGAOJDKN_00162) | 130163..130708 | + | 546 | WP_029490179 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PUP43_RS00780 (BGAOJDKN_00163) | 130638..131000 | + | 363 | WP_010379880 | P-type conjugative transfer protein TrbJ | - |
| PUP43_RS00785 (BGAOJDKN_00164) | 131000..132373 | + | 1374 | WP_001381324 | conjugal transfer pilus assembly protein TraH | traH |
| PUP43_RS00790 (BGAOJDKN_00165) | 132370..135192 | + | 2823 | WP_074512607 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PUP43_RS00795 (BGAOJDKN_00166) | 135213..135710 | + | 498 | WP_065555281 | surface exclusion protein | - |
| PUP43_RS00800 (BGAOJDKN_00167) | 135742..136473 | + | 732 | WP_001377635 | conjugal transfer complement resistance protein TraT | - |
| PUP43_RS00805 (BGAOJDKN_00168) | 136676..137413 | + | 738 | WP_000199908 | hypothetical protein | - |
| PUP43_RS00810 (BGAOJDKN_00169) | 137464..139689 | + | 2226 | WP_001460385 | type IV conjugative transfer system coupling protein TraD | virb4 |