T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 80653..107026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP20_RS00465 (IFJOEOHB_00090) | 80019..80246 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| PUP20_RS00470 (IFJOEOHB_00091) | 80246..80644 | + | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| PUP20_RS00475 (IFJOEOHB_00092) | 80653..82806 | - | 2154 | WP_000009324 | type IV conjugative transfer system coupling protein TraD | virb4 |
| PUP20_RS00480 (IFJOEOHB_00093) | 83059..83790 | - | 732 | WP_023565183 | conjugal transfer complement resistance protein TraT | - |
| PUP20_RS00485 (IFJOEOHB_00094) | 83822..84319 | - | 498 | WP_000605857 | entry exclusion protein | - |
| PUP20_RS00490 (IFJOEOHB_00095) | 84335..87157 | - | 2823 | WP_001007018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PUP20_RS00495 | 87154..88527 | - | 1374 | WP_001517790 | conjugal transfer pilus assembly protein TraH | traH |
| PUP20_RS00500 (IFJOEOHB_00097) | 88527..88907 | - | 381 | WP_001389370 | F-type conjugal transfer protein TrbF | - |
| PUP20_RS00505 (IFJOEOHB_00098) | 88894..89235 | - | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| PUP20_RS00510 (IFJOEOHB_00099) | 89165..89710 | - | 546 | WP_000059851 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PUP20_RS00515 (IFJOEOHB_00100) | 89697..89981 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PUP20_RS00520 (IFJOEOHB_00101) | 90062..90376 | + | 315 | WP_001324103 | hypothetical protein | - |
| PUP20_RS00525 (IFJOEOHB_00102) | 90378..90725 | - | 348 | WP_001287910 | conjugal transfer protein TrbA | - |
| PUP20_RS00530 (IFJOEOHB_00103) | 90741..91484 | - | 744 | WP_001030393 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PUP20_RS00535 (IFJOEOHB_00104) | 91477..91734 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| PUP20_RS00540 (IFJOEOHB_00105) | 91761..93569 | - | 1809 | WP_000821841 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PUP20_RS00545 (IFJOEOHB_00106) | 93566..94204 | - | 639 | WP_000777700 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PUP20_RS00550 (IFJOEOHB_00107) | 94213..95205 | - | 993 | WP_000830183 | conjugal transfer pilus assembly protein TraU | traU |
| PUP20_RS00555 (IFJOEOHB_00108) | 95202..95834 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| PUP20_RS00560 (IFJOEOHB_00109) | 95831..96217 | - | 387 | WP_000099686 | type-F conjugative transfer system protein TrbI | - |
| PUP20_RS00565 (IFJOEOHB_00110) | 96214..98841 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| PUP20_RS00570 | 99001..99222 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| PUP20_RS00575 (IFJOEOHB_00111) | 99357..99872 | - | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| PUP20_RS00580 (IFJOEOHB_00112) | 99869..100120 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| PUP20_RS00585 (IFJOEOHB_00113) | 100132..100329 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| PUP20_RS00590 (IFJOEOHB_00114) | 100316..100906 | - | 591 | WP_001376242 | conjugal transfer pilus-stabilizing protein TraP | - |
| PUP20_RS00595 (IFJOEOHB_00115) | 100896..102323 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PUP20_RS00600 (IFJOEOHB_00116) | 102323..103051 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| PUP20_RS00605 (IFJOEOHB_00117) | 103038..103604 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| PUP20_RS00610 (IFJOEOHB_00118) | 103626..103937 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| PUP20_RS00615 (IFJOEOHB_00119) | 103952..104317 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| PUP20_RS00620 (IFJOEOHB_00120) | 104350..104745 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PUP20_RS00625 (IFJOEOHB_00121) | 104844..105533 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| PUP20_RS00630 (IFJOEOHB_00122) | 105720..106103 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PUP20_RS00635 (IFJOEOHB_00123) | 106436..107026 | + | 591 | WP_186235717 | transglycosylase SLT domain-containing protein | - |
| PUP20_RS00640 (IFJOEOHB_00124) | 107323..108144 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| PUP20_RS00645 (IFJOEOHB_00125) | 108263..108550 | - | 288 | WP_000107535 | hypothetical protein | - |
| PUP20_RS00650 | 108575..108781 | - | 207 | WP_000547971 | hypothetical protein | - |
| PUP20_RS00655 | 108851..109024 | + | 174 | Protein_129 | hypothetical protein | - |
| PUP20_RS00660 | 109022..109252 | - | 231 | WP_001426396 | hypothetical protein | - |
| PUP20_RS00665 (IFJOEOHB_00126) | 109472..109597 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| PUP20_RS00670 | 109539..109688 | - | 150 | Protein_132 | plasmid maintenance protein Mok | - |
| PUP20_RS00675 (IFJOEOHB_00128) | 109867..110629 | - | 763 | Protein_133 | plasmid SOS inhibition protein A | - |
| PUP20_RS00680 (IFJOEOHB_00129) | 110626..111060 | - | 435 | WP_064770609 | conjugation system SOS inhibitor PsiB | - |
| PUP20_RS00685 | 111115..111312 | - | 198 | Protein_135 | hypothetical protein | - |
| PUP20_RS00690 (IFJOEOHB_00130) | 111340..111573 | - | 234 | WP_000005987 | DUF905 family protein | - |