T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 106956..139882
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP13_RS00555 (PNEFENPC_00122) | 102708..103142 | + | 435 | WP_000845950 | conjugation system SOS inhibitor PsiB | - |
| PUP13_RS00560 (PNEFENPC_00123) | 103139..103858 | + | 720 | WP_074524782 | plasmid SOS inhibition protein A | - |
| PUP13_RS00565 (PNEFENPC_00124) | 103855..104169 | + | 315 | WP_000872086 | hypothetical protein | - |
| PUP13_RS00570 | 104359..104472 | + | 114 | Protein_115 | DUF5431 family protein | - |
| PUP13_RS00575 | 104417..104539 | + | 123 | WP_223163518 | Hok/Gef family protein | - |
| PUP13_RS00580 | 104838..105135 | - | 298 | Protein_117 | hypothetical protein | - |
| PUP13_RS00585 (PNEFENPC_00126) | 105432..105728 | + | 297 | WP_001272251 | hypothetical protein | - |
| PUP13_RS00590 (PNEFENPC_00127) | 105838..106659 | + | 822 | WP_032257143 | DUF932 domain-containing protein | - |
| PUP13_RS00595 (PNEFENPC_00128) | 106956..107558 | - | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | - |
| PUP13_RS00600 (PNEFENPC_00129) | 107881..108264 | + | 384 | WP_000124827 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PUP13_RS00605 (PNEFENPC_00130) | 108455..109108 | + | 654 | WP_016241851 | hypothetical protein | - |
| PUP13_RS00610 (PNEFENPC_00131) | 109233..109460 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| PUP13_RS00615 (PNEFENPC_00132) | 109493..109858 | + | 366 | WP_001099002 | type IV conjugative transfer system pilin TraA | - |
| PUP13_RS00620 (PNEFENPC_00133) | 109873..110184 | + | 312 | WP_000012116 | type IV conjugative transfer system protein TraL | traL |
| PUP13_RS00625 (PNEFENPC_00134) | 110206..110772 | + | 567 | WP_000399801 | type IV conjugative transfer system protein TraE | traE |
| PUP13_RS00630 (PNEFENPC_00135) | 110759..111487 | + | 729 | WP_001230776 | type-F conjugative transfer system secretin TraK | traK |
| PUP13_RS00635 (PNEFENPC_00136) | 111487..112938 | + | 1452 | WP_074512573 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PUP13_RS00640 (PNEFENPC_00137) | 112928..113494 | + | 567 | WP_044715774 | conjugal transfer pilus-stabilizing protein TraP | - |
| PUP13_RS00645 (PNEFENPC_00138) | 113481..113801 | + | 321 | WP_001057295 | conjugal transfer protein TrbD | virb4 |
| PUP13_RS00650 (PNEFENPC_00139) | 113794..114045 | + | 252 | WP_001038347 | conjugal transfer protein TrbG | - |
| PUP13_RS00655 (PNEFENPC_00140) | 114042..114557 | + | 516 | WP_000809905 | type IV conjugative transfer system lipoprotein TraV | traV |
| PUP13_RS00660 (PNEFENPC_00141) | 114692..114913 | + | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| PUP13_RS00665 (PNEFENPC_00142) | 114906..115040 | + | 135 | WP_265327905 | hypothetical protein | - |
| PUP13_RS00670 (PNEFENPC_00143) | 115067..116638 | - | 1572 | WP_088551911 | IS66-like element ISCro1 family transposase | - |
| PUP13_RS00675 (PNEFENPC_00144) | 116658..117005 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| PUP13_RS00680 (PNEFENPC_00145) | 117005..117682 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| PUP13_RS00685 | 117736..117972 | + | 237 | Protein_138 | hypothetical protein | - |
| PUP13_RS00690 (PNEFENPC_00146) | 118031..120661 | + | 2631 | WP_000069762 | type IV secretion system protein TraC | virb4 |
| PUP13_RS00695 (PNEFENPC_00147) | 120658..121044 | + | 387 | WP_074512566 | type-F conjugative transfer system protein TrbI | - |
| PUP13_RS00700 (PNEFENPC_00148) | 121041..121673 | + | 633 | WP_001297504 | type-F conjugative transfer system protein TraW | traW |
| PUP13_RS00705 (PNEFENPC_00149) | 121670..122662 | + | 993 | WP_074524496 | conjugal transfer pilus assembly protein TraU | traU |
| PUP13_RS00710 (PNEFENPC_00150) | 122676..123218 | + | 543 | WP_074512604 | hypothetical protein | - |
| PUP13_RS00715 (PNEFENPC_00151) | 123221..123751 | - | 531 | WP_272954718 | hypothetical protein | - |
| PUP13_RS00720 (PNEFENPC_00152) | 123947..124393 | + | 447 | WP_001510296 | hypothetical protein | - |
| PUP13_RS00725 | 124393..124545 | + | 153 | Protein_146 | TraU family protein | - |
| PUP13_RS00730 (PNEFENPC_00153) | 124571..125035 | + | 465 | WP_001399772 | hypothetical protein | - |
| PUP13_RS00735 (PNEFENPC_00154) | 125217..125735 | + | 519 | WP_000009087 | hypothetical protein | - |
| PUP13_RS00740 | 125762..125851 | + | 90 | Protein_149 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PUP13_RS00745 (PNEFENPC_00155) | 125943..126122 | + | 180 | WP_097377525 | hypothetical protein | - |
| PUP13_RS00750 (PNEFENPC_00156) | 126497..127135 | + | 639 | WP_032256597 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PUP13_RS00755 (PNEFENPC_00157) | 127132..128940 | + | 1809 | WP_032256595 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PUP13_RS00760 (PNEFENPC_00158) | 128967..129227 | + | 261 | WP_000864333 | conjugal transfer protein TrbE | - |
| PUP13_RS00765 (PNEFENPC_00159) | 129220..129963 | + | 744 | WP_074526448 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PUP13_RS00770 (PNEFENPC_00160) | 130133..130369 | + | 237 | WP_001346259 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PUP13_RS00775 (PNEFENPC_00161) | 130356..130901 | + | 546 | WP_029490179 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PUP13_RS00780 (PNEFENPC_00162) | 130831..131193 | + | 363 | WP_010379880 | P-type conjugative transfer protein TrbJ | - |
| PUP13_RS00785 (PNEFENPC_00163) | 131193..132566 | + | 1374 | WP_001381324 | conjugal transfer pilus assembly protein TraH | traH |
| PUP13_RS00790 (PNEFENPC_00164) | 132563..135385 | + | 2823 | WP_074512607 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PUP13_RS00795 (PNEFENPC_00165) | 135406..135903 | + | 498 | WP_065555281 | surface exclusion protein | - |
| PUP13_RS00800 (PNEFENPC_00166) | 135935..136666 | + | 732 | WP_001377635 | conjugal transfer complement resistance protein TraT | - |
| PUP13_RS00805 (PNEFENPC_00167) | 136869..137606 | + | 738 | WP_000199908 | hypothetical protein | - |
| PUP13_RS00810 (PNEFENPC_00168) | 137657..139882 | + | 2226 | WP_001460385 | type IV conjugative transfer system coupling protein TraD | virb4 |