T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 60187..87027
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP06_RS00300 (PHNPHHHP_00057) | 56154..56588 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| PUP06_RS00305 (PHNPHHHP_00058) | 56585..57347 | + | 763 | Protein_61 | plasmid SOS inhibition protein A | - |
| PUP06_RS00310 (PHNPHHHP_00059) | 57526..57675 | + | 150 | Protein_62 | plasmid maintenance protein Mok | - |
| PUP06_RS00315 | 57617..57742 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| PUP06_RS00320 | 57962..58192 | + | 231 | WP_001426396 | hypothetical protein | - |
| PUP06_RS00325 | 58190..58363 | - | 174 | Protein_65 | hypothetical protein | - |
| PUP06_RS00330 | 58433..58639 | + | 207 | WP_000547968 | hypothetical protein | - |
| PUP06_RS00335 (PHNPHHHP_00060) | 58664..58951 | + | 288 | WP_000107544 | hypothetical protein | - |
| PUP06_RS00340 (PHNPHHHP_00061) | 59069..59890 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| PUP06_RS00345 (PHNPHHHP_00062) | 60187..60834 | - | 648 | WP_031943493 | transglycosylase SLT domain-containing protein | virB1 |
| PUP06_RS00350 (PHNPHHHP_00063) | 61111..61494 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PUP06_RS00355 (PHNPHHHP_00064) | 61685..62371 | + | 687 | WP_000332484 | PAS domain-containing protein | - |
| PUP06_RS00360 | 62465..62692 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| PUP06_RS00365 (PHNPHHHP_00066) | 62726..63085 | + | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| PUP06_RS00370 (PHNPHHHP_00067) | 63100..63411 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| PUP06_RS00375 (PHNPHHHP_00068) | 63433..63999 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| PUP06_RS00380 (PHNPHHHP_00069) | 63986..64714 | + | 729 | WP_001230813 | type-F conjugative transfer system secretin TraK | traK |
| PUP06_RS00385 (PHNPHHHP_00070) | 64714..66141 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PUP06_RS00390 (PHNPHHHP_00071) | 66131..66721 | + | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| PUP06_RS00395 (PHNPHHHP_00072) | 66708..67028 | + | 321 | WP_001057287 | conjugal transfer protein TrbD | virb4 |
| PUP06_RS00400 (PHNPHHHP_00073) | 67021..67272 | + | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| PUP06_RS00405 (PHNPHHHP_00074) | 67269..67784 | + | 516 | WP_015059130 | type IV conjugative transfer system lipoprotein TraV | traV |
| PUP06_RS00410 | 67919..68140 | + | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| PUP06_RS00415 (PHNPHHHP_00075) | 68133..68609 | + | 477 | WP_015059129 | hypothetical protein | - |
| PUP06_RS00420 | 68689..68903 | + | 215 | Protein_84 | hypothetical protein | - |
| PUP06_RS00425 (PHNPHHHP_00076) | 68931..69293 | + | 363 | WP_000836675 | hypothetical protein | - |
| PUP06_RS00430 (PHNPHHHP_00077) | 69419..72049 | + | 2631 | WP_000069764 | type IV secretion system protein TraC | virb4 |
| PUP06_RS00435 (PHNPHHHP_00078) | 72046..72432 | + | 387 | WP_000214092 | type-F conjugative transfer system protein TrbI | - |
| PUP06_RS00440 (PHNPHHHP_00079) | 72429..73061 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| PUP06_RS00445 (PHNPHHHP_00080) | 73058..74050 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| PUP06_RS00450 (PHNPHHHP_00081) | 74059..74697 | + | 639 | WP_000777692 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PUP06_RS00455 (PHNPHHHP_00082) | 74694..76502 | + | 1809 | WP_000821821 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PUP06_RS00460 (PHNPHHHP_00083) | 76529..76786 | + | 258 | WP_000864352 | conjugal transfer protein TrbE | - |
| PUP06_RS00465 (PHNPHHHP_00084) | 76779..77522 | + | 744 | WP_001430248 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PUP06_RS00470 (PHNPHHHP_00085) | 77538..77885 | + | 348 | WP_001287891 | conjugal transfer protein TrbA | - |
| PUP06_RS00475 (PHNPHHHP_00086) | 78004..78288 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PUP06_RS00480 (PHNPHHHP_00087) | 78275..78820 | + | 546 | WP_000059821 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PUP06_RS00485 (PHNPHHHP_00088) | 78750..79112 | + | 363 | WP_010379880 | P-type conjugative transfer protein TrbJ | - |
| PUP06_RS00490 (PHNPHHHP_00089) | 79112..80485 | + | 1374 | WP_065802015 | conjugal transfer pilus assembly protein TraH | traH |
| PUP06_RS00495 (PHNPHHHP_00090) | 80482..83307 | + | 2826 | WP_001007045 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PUP06_RS00500 (PHNPHHHP_00091) | 83304..83813 | + | 510 | WP_031943494 | conjugal transfer entry exclusion protein TraS | - |
| PUP06_RS00505 (PHNPHHHP_00092) | 83827..84558 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| PUP06_RS00510 (PHNPHHHP_00093) | 84811..87027 | + | 2217 | WP_022630316 | type IV conjugative transfer system coupling protein TraD | virb4 |