T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52006..78418
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUP08_RS00320 (NPMPAJFF_00060) | 52006..54222 | - | 2217 | WP_053894279 | type IV conjugative transfer system coupling protein TraD | virb4 |
| PUP08_RS00325 (NPMPAJFF_00061) | 54475..55206 | - | 732 | WP_024221017 | conjugal transfer complement resistance protein TraT | - |
| PUP08_RS00330 (NPMPAJFF_00062) | 55238..55735 | - | 498 | WP_000605861 | hypothetical protein | - |
| PUP08_RS00335 (NPMPAJFF_00063) | 55754..58573 | - | 2820 | WP_001007057 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PUP08_RS00340 (NPMPAJFF_00064) | 58570..59943 | - | 1374 | WP_001137364 | conjugal transfer pilus assembly protein TraH | traH |
| PUP08_RS00345 (NPMPAJFF_00065) | 59930..60322 | - | 393 | WP_000660703 | F-type conjugal transfer protein TrbF | - |
| PUP08_RS00350 (NPMPAJFF_00066) | 60303..60644 | - | 342 | WP_001448115 | P-type conjugative transfer protein TrbJ | - |
| PUP08_RS00355 (NPMPAJFF_00067) | 60574..61119 | - | 546 | WP_000059824 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PUP08_RS00360 (NPMPAJFF_00068) | 61106..61390 | - | 285 | WP_001448202 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PUP08_RS00365 (NPMPAJFF_00069) | 61517..61855 | - | 339 | WP_001287905 | conjugal transfer protein TrbA | - |
| PUP08_RS00370 (NPMPAJFF_00070) | 61871..62614 | - | 744 | WP_001749618 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PUP08_RS00375 (NPMPAJFF_00071) | 62607..62864 | - | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| PUP08_RS00380 (NPMPAJFF_00072) | 62891..64699 | - | 1809 | WP_024221016 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PUP08_RS00385 (NPMPAJFF_00073) | 64696..65334 | - | 639 | WP_001080257 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PUP08_RS00390 (NPMPAJFF_00074) | 65343..65648 | - | 306 | WP_000224411 | hypothetical protein | - |
| PUP08_RS00395 (NPMPAJFF_00075) | 65678..66670 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| PUP08_RS00400 (NPMPAJFF_00076) | 66667..67299 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| PUP08_RS00405 (NPMPAJFF_00077) | 67296..67682 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| PUP08_RS00410 (NPMPAJFF_00078) | 67679..70306 | - | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| PUP08_RS00415 (NPMPAJFF_00079) | 70466..70687 | - | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| PUP08_RS00420 (NPMPAJFF_00080) | 70822..71337 | - | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| PUP08_RS00425 (NPMPAJFF_00081) | 71334..71585 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| PUP08_RS00430 (NPMPAJFF_00082) | 71578..71898 | - | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| PUP08_RS00435 (NPMPAJFF_00083) | 71885..72469 | - | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| PUP08_RS00440 (NPMPAJFF_00084) | 72459..73886 | - | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PUP08_RS00445 (NPMPAJFF_00085) | 73886..74614 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| PUP08_RS00450 (NPMPAJFF_00086) | 74601..75167 | - | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| PUP08_RS00455 (NPMPAJFF_00087) | 75189..75500 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| PUP08_RS00460 (NPMPAJFF_00088) | 75505..75867 | - | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| PUP08_RS00465 (NPMPAJFF_00089) | 75901..76128 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| PUP08_RS00470 (NPMPAJFF_00090) | 76222..76908 | - | 687 | WP_000332487 | PAS domain-containing protein | - |
| PUP08_RS00475 (NPMPAJFF_00091) | 77102..77485 | - | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PUP08_RS00480 (NPMPAJFF_00092) | 77780..78418 | + | 639 | WP_281440555 | transglycosylase SLT domain-containing protein | - |
| PUP08_RS00485 (NPMPAJFF_00093) | 78715..79536 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| PUP08_RS00490 (NPMPAJFF_00094) | 79657..79944 | - | 288 | WP_000107537 | hypothetical protein | - |
| PUP08_RS00495 | 80413..80661 | - | 249 | WP_071606928 | hypothetical protein | - |
| PUP08_RS00500 (NPMPAJFF_00095) | 80583..80813 | - | 231 | WP_001333093 | hypothetical protein | - |
| PUP08_RS00505 (NPMPAJFF_00096) | 80813..81376 | - | 564 | WP_001311069 | class I SAM-dependent methyltransferase | - |
| PUP08_RS00510 (NPMPAJFF_00097) | 81423..82784 | - | 1362 | WP_000170667 | DUF3560 domain-containing protein | - |
| PUP08_RS00515 (NPMPAJFF_00098) | 82836..83066 | - | 231 | WP_000155844 | hypothetical protein | - |