T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34005..54114
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS484_RS00165 (pKP96_028) | 30955..32163 | + | 1209 | WP_001339197 | IS4-like element ISVsa5 family transposase | - |
| HS484_RS00405 | 32176..32517 | - | 342 | Protein_33 | restriction endonuclease | - |
| HS484_RS00175 (pKP96_029) | 32573..32806 | - | 234 | WP_001191790 | hypothetical protein | - |
| HS484_RS00180 (pKP96_030) | 32920..33234 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS484_RS00185 (pKP96_031) | 33231..33575 | - | 345 | WP_001749964 | hypothetical protein | - |
| HS484_RS00190 (pKP96_032) | 33591..33962 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HS484_RS00195 (pKP96_033) | 34005..34739 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HS484_RS00200 (pKP96_034) | 34748..35029 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HS484_RS00205 (pKP96_035) | 35039..35332 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HS484_RS00210 (pKP96_036) | 35382..35699 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HS484_RS00215 (pKP96_037) | 35699..38299 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS484_RS00220 (pKP96_038) | 38317..39030 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HS484_RS00225 (pKP96_039) | 39038..39265 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HS484_RS00230 (pKP96_040) | 39281..40321 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HS484_RS00235 (pKP96_041) | 40392..40550 | + | 159 | WP_012561180 | hypothetical protein | - |
| HS484_RS00240 (pKP96_042) | 40540..41238 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HS484_RS00245 (pKP96_043) | 41249..42133 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HS484_RS00250 (pKP96_044) | 42133..43293 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HS484_RS00255 (pKP96_045) | 43335..44330 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HS484_RS00260 (pKP96_046) | 44330..44863 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HS484_RS00265 | 45037..45222 | - | 186 | WP_315970982 | DUF6710 family protein | - |
| HS484_RS00410 | 45427..45750 | - | 324 | WP_226331933 | DUF6710 family protein | - |
| HS484_RS00275 (pKP96_049) | 46024..46677 | + | 654 | Protein_54 | EamA family transporter | - |
| HS484_RS00280 (pKP96_050) | 46709..47908 | - | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| HS484_RS00285 (pKP96_051) | 48014..48664 | + | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HS484_RS00290 (pKP96_051a) | 48696..48938 | - | 243 | WP_000844627 | transposase | - |
| HS484_RS00295 (pKP96_052) | 49170..49343 | - | 174 | WP_001749978 | hypothetical protein | - |
| HS484_RS00300 (pKP96_053) | 49343..52585 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| HS484_RS00305 (pKP96_054) | 52585..54114 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HS484_RS00310 (pKP96_055) | 54116..54532 | - | 417 | WP_001749975 | hypothetical protein | - |
| HS484_RS00415 | 55023..55442 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| HS484_RS00320 (pKP96_057) | 55451..56167 | + | 717 | WP_001749973 | StbB family protein | - |
| HS484_RS00325 (pKP96_058) | 56169..56537 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| HS484_RS00330 (pKP96_059) | 56719..57063 | + | 345 | WP_000999874 | hypothetical protein | - |
| HS484_RS00335 (pKP96_060) | 57174..57494 | - | 321 | WP_001749971 | protein CcgAII | - |
| HS484_RS00340 (pKP96_061) | 57549..57728 | - | 180 | WP_000214483 | protein CcgAI | - |
| HS484_RS00345 (pKP96_062) | 58455..58964 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |