T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49376..60696
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JV42_RS00380 (JV42_00370) | 45407..45640 | - | 234 | WP_001191890 | hypothetical protein | - |
| JV42_RS00385 (JV42_00375) | 45622..46239 | - | 618 | WP_001249395 | hypothetical protein | - |
| JV42_RS00390 (JV42_00380) | 46407..49379 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| JV42_RS00395 (JV42_00385) | 49376..51241 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| JV42_RS00400 (JV42_00390) | 51252..51836 | + | 585 | WP_000332868 | hypothetical protein | - |
| JV42_RS00405 (JV42_00395) | 51793..52422 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| JV42_RS00410 (JV42_00400) | 52432..52878 | + | 447 | WP_000122507 | hypothetical protein | - |
| JV42_RS00415 (JV42_00405) | 52888..53265 | + | 378 | WP_000869297 | hypothetical protein | - |
| JV42_RS00420 (JV42_00410) | 53265..53927 | + | 663 | WP_001231464 | hypothetical protein | - |
| JV42_RS00425 | 54108..54251 | + | 144 | WP_001275801 | hypothetical protein | - |
| JV42_RS00430 (JV42_00415) | 54263..54628 | + | 366 | WP_001052530 | hypothetical protein | - |
| JV42_RS00435 (JV42_00420) | 54773..55054 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| JV42_RS00440 (JV42_00425) | 55051..55677 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| JV42_RS00445 (JV42_00430) | 55661..56578 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| JV42_RS00450 (JV42_00435) | 56578..57891 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| JV42_RS00455 (JV42_00440) | 57888..58466 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| JV42_RS00460 (JV42_00445) | 58470..58862 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| JV42_RS00465 (JV42_00450) | 59147..60106 | + | 960 | Protein_87 | IS1380-like element ISEcp1 family transposase | - |
| JV42_RS00470 (JV42_00455) | 60100..60807 | - | 708 | WP_000637385 | conjugal transfer protein TraC | - |
| JV42_RS00475 (JV42_00460) | 60804..61511 | - | 708 | WP_001259346 | DsbC family protein | - |