T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50205..59295
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JV40_RS00390 (JV40_00370) | 46236..46469 | - | 234 | WP_001191890 | hypothetical protein | - |
| JV40_RS00395 (JV40_00375) | 46451..47068 | - | 618 | WP_001249395 | hypothetical protein | - |
| JV40_RS00400 (JV40_00380) | 47236..50208 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| JV40_RS00405 (JV40_00385) | 50205..52070 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| JV40_RS00410 (JV40_00390) | 52081..52665 | + | 585 | WP_000332868 | hypothetical protein | - |
| JV40_RS00415 (JV40_00395) | 52622..53251 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| JV40_RS00420 (JV40_00400) | 53261..53707 | + | 447 | WP_000122507 | hypothetical protein | - |
| JV40_RS00425 (JV40_00405) | 53717..54094 | + | 378 | WP_000869297 | hypothetical protein | - |
| JV40_RS00430 (JV40_00410) | 54094..54756 | + | 663 | WP_001231464 | hypothetical protein | - |
| JV40_RS00435 | 54937..55080 | + | 144 | WP_001275801 | hypothetical protein | - |
| JV40_RS00440 (JV40_00415) | 55080..55457 | + | 378 | WP_001326174 | hypothetical protein | - |
| JV40_RS00445 (JV40_00420) | 55602..55883 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| JV40_RS00450 (JV40_00425) | 55880..56506 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| JV40_RS00455 (JV40_00430) | 56490..57407 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| JV40_RS00460 (JV40_00435) | 57407..58720 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| JV40_RS00465 (JV40_00440) | 58717..59295 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| JV40_RS00470 (JV40_00445) | 59299..59691 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| JV40_RS00475 (JV40_00450) | 59976..61238 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| JV40_RS00480 (JV40_00455) | 61562..62707 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| JV40_RS00485 (JV40_00460) | 62801..63334 | + | 534 | WP_001221666 | lipocalin family protein | - |
| JV40_RS00490 (JV40_00465) | 63331..63648 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| JV40_RS00495 (JV40_00470) | 63905..64270 | + | 366 | Protein_91 | LuxR family transcriptional regulator | - |