T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24876..44732
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS908_RS00105 | 20408..20910 | + | 503 | Protein_20 | GNAT family N-acetyltransferase | - |
| HS908_RS00110 (D616_p72022) | 20967..21959 | - | 993 | WP_003107582 | TniB family NTP-binding protein | - |
| HS908_RS00115 (D616_p72003) | 21956..22387 | - | 432 | Protein_22 | Mu transposase C-terminal domain-containing protein | - |
| HS908_RS00120 (D616_p72034) | 22441..23145 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HS908_RS00125 | 23444..23677 | - | 234 | WP_001191790 | hypothetical protein | - |
| HS908_RS00130 (D616_p72004) | 23791..24105 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS908_RS00135 (D616_p72035) | 24102..24446 | - | 345 | WP_001749964 | hypothetical protein | - |
| HS908_RS00140 (D616_p72020) | 24462..24833 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HS908_RS00145 (D616_p72019) | 24876..25610 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HS908_RS00150 (D616_p72018) | 25619..25900 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HS908_RS00155 (D616_p72017) | 25911..26204 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HS908_RS00160 (D616_p72016) | 26254..26571 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HS908_RS00165 (D616_p72015) | 26571..29171 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS908_RS00170 (D616_p72014) | 29189..29902 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HS908_RS00175 | 29910..30137 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HS908_RS00180 (D616_p72013) | 30153..31193 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HS908_RS00185 (D616_p72012) | 31264..31422 | + | 159 | WP_012561180 | hypothetical protein | - |
| HS908_RS00190 (D616_p72011) | 31412..32110 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HS908_RS00195 (D616_p72010) | 32121..33007 | + | 887 | Protein_38 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HS908_RS00200 (D616_p72009) | 33007..34167 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HS908_RS00205 (D616_p72008) | 34210..35205 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HS908_RS00210 (D616_p72007) | 35205..35738 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HS908_RS00300 | 35913..36365 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| HS908_RS00220 | 36639..37292 | + | 654 | Protein_43 | EamA family transporter | - |
| HS908_RS00225 (D616_p72006) | 37324..38523 | - | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| HS908_RS00230 (D616_p72005) | 38629..39279 | + | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HS908_RS00235 (D616_p72036) | 39312..39554 | - | 243 | WP_000844627 | transposase | - |
| HS908_RS00240 | 39788..39961 | - | 174 | WP_001749978 | hypothetical protein | - |
| HS908_RS00245 (D616_p72037) | 39961..43203 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| HS908_RS00250 (D616_p72038) | 43203..44732 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HS908_RS00255 (D616_p72039) | 44734..45150 | - | 417 | WP_001749975 | hypothetical protein | - |
| HS908_RS00305 | 45643..46062 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| HS908_RS00265 (D616_p72041) | 46071..46787 | + | 717 | WP_001749973 | StbB family protein | - |
| HS908_RS00270 (D616_p72042) | 46789..47157 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| HS908_RS00275 | 47339..47683 | + | 345 | WP_000999874 | hypothetical protein | - |
| HS908_RS00280 (D616_p72043) | 48002..48442 | + | 441 | WP_000861760 | translesion error-prone DNA polymerase V autoproteolytic subunit MucA | - |
| HS908_RS00285 (D616_p72044) | 48430..49695 | + | 1266 | WP_001749980 | translesion error-prone DNA polymerase V subunit MucB | - |