T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 161870..182931
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| At1D1108_RS26750 (At1D1108_51730) | 157385..157990 | + | 606 | WP_121557920 | arginase family protein | - |
| At1D1108_RS26755 (At1D1108_51740) | 158030..158764 | - | 735 | WP_121557921 | IS21-like element helper ATPase IstB | - |
| At1D1108_RS26760 (At1D1108_51750) | 158772..160265 | - | 1494 | Protein_145 | IS21 family transposase | - |
| At1D1108_RS28080 (At1D1108_51760) | 160439..160612 | + | 174 | WP_162995352 | hypothetical protein | - |
| At1D1108_RS26765 (At1D1108_51770) | 160653..161165 | - | 513 | WP_337587077 | thermonuclease family protein | - |
| At1D1108_RS26770 | 161176..161442 | - | 267 | WP_121557960 | WGR domain-containing protein | - |
| At1D1108_RS26775 (At1D1108_51780) | 161656..161853 | - | 198 | WP_121557924 | hypothetical protein | - |
| At1D1108_RS26780 (At1D1108_51790) | 161870..163828 | - | 1959 | WP_121557925 | Ti-type conjugative transfer system protein TraG | virb4 |
| At1D1108_RS26785 (At1D1108_51800) | 163815..164030 | - | 216 | WP_052821066 | type IV conjugative transfer system coupling protein TraD | - |
| At1D1108_RS26790 (At1D1108_51810) | 164035..164298 | - | 264 | WP_121557961 | TraC family protein | - |
| At1D1108_RS26795 (At1D1108_51820) | 164546..168178 | + | 3633 | WP_121557926 | Ti-type conjugative transfer relaxase TraA | - |
| At1D1108_RS26800 (At1D1108_51830) | 168235..168741 | + | 507 | WP_233283755 | conjugative transfer signal peptidase TraF | - |
| At1D1108_RS26805 (At1D1108_51840) | 168731..169897 | + | 1167 | WP_121557928 | conjugal transfer protein TraB | - |
| At1D1108_RS26810 (At1D1108_51850) | 169911..170525 | + | 615 | WP_121557929 | TraH family protein | - |
| At1D1108_RS26815 (At1D1108_51860) | 170560..171180 | - | 621 | WP_121557930 | hypothetical protein | - |
| At1D1108_RS26820 (At1D1108_51870) | 171177..171356 | - | 180 | WP_052821072 | hypothetical protein | - |
| At1D1108_RS26825 (At1D1108_51880) | 171707..172411 | + | 705 | WP_121557931 | transcriptional regulator TraR | - |
| At1D1108_RS26830 (At1D1108_51890) | 172422..172721 | - | 300 | WP_121557932 | transcriptional repressor TraM | - |
| At1D1108_RS26835 (At1D1108_51900) | 173067..173378 | + | 312 | WP_121557933 | hypothetical protein | - |
| At1D1108_RS26840 (At1D1108_51910) | 173385..174677 | - | 1293 | WP_121557934 | IncP-type conjugal transfer protein TrbI | virB10 |
| At1D1108_RS26845 (At1D1108_51920) | 174693..175139 | - | 447 | WP_233283745 | conjugal transfer protein TrbH | - |
| At1D1108_RS26850 (At1D1108_51930) | 175143..175973 | - | 831 | WP_121557935 | P-type conjugative transfer protein TrbG | virB9 |
| At1D1108_RS26855 (At1D1108_51940) | 175988..176650 | - | 663 | WP_112671253 | conjugal transfer protein TrbF | virB8 |
| At1D1108_RS26860 (At1D1108_51950) | 176672..177850 | - | 1179 | WP_121557936 | P-type conjugative transfer protein TrbL | virB6 |
| At1D1108_RS26865 (At1D1108_51960) | 177844..178047 | - | 204 | WP_121557937 | entry exclusion protein TrbK | - |
| At1D1108_RS26870 (At1D1108_51970) | 178044..178853 | - | 810 | WP_121557938 | P-type conjugative transfer protein TrbJ | virB5 |
| At1D1108_RS26875 (At1D1108_51980) | 178846..181281 | - | 2436 | WP_121557939 | conjugal transfer protein TrbE | virb4 |
| At1D1108_RS26880 (At1D1108_51990) | 181292..181591 | - | 300 | WP_121557940 | conjugal transfer protein TrbD | virB3 |
| At1D1108_RS26885 (At1D1108_52000) | 181584..181976 | - | 393 | WP_121557941 | TrbC/VirB2 family protein | virB2 |
| At1D1108_RS26890 (At1D1108_52010) | 181966..182931 | - | 966 | WP_121557963 | P-type conjugative transfer ATPase TrbB | virB11 |