T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11035..53732
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTI29_RS25020 (CTI29_25250) | 6097..7164 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| CTI29_RS25025 (CTI29_25255) | 7164..7601 | + | 438 | WP_000539806 | type IV pilus biogenesis protein PilM | - |
| CTI29_RS25030 (CTI29_25260) | 7615..9297 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| CTI29_RS25035 (CTI29_25265) | 9290..10585 | + | 1296 | WP_023518855 | type 4b pilus protein PilO2 | - |
| CTI29_RS25040 (CTI29_25270) | 10572..11024 | + | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| CTI29_RS25045 (CTI29_25275) | 11035..12588 | + | 1554 | WP_023518854 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CTI29_RS25050 (CTI29_25280) | 12601..13686 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| CTI29_RS25055 (CTI29_25285) | 13703..14317 | + | 615 | WP_000908227 | type 4 pilus major pilin | - |
| CTI29_RS25060 (CTI29_25290) | 14327..14887 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| CTI29_RS25065 (CTI29_25295) | 14872..15528 | + | 657 | WP_001401940 | A24 family peptidase | - |
| CTI29_RS25070 (CTI29_25300) | 15516..16898 | + | 1383 | WP_224476474 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CTI29_RS27455 | 17188..17472 | - | 285 | WP_187642572 | pilus assembly protein PilV | - |
| CTI29_RS25085 (CTI29_25315) | 17471..18625 | + | 1155 | WP_001139955 | site-specific integrase | - |
| CTI29_RS25090 (CTI29_25320) | 18776..19600 | + | 825 | WP_023518851 | conjugal transfer protein TraE | traE |
| CTI29_RS25095 (CTI29_25325) | 19686..20888 | + | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| CTI29_RS25100 (CTI29_25330) | 20948..21532 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| CTI29_RS25105 (CTI29_25335) | 21927..22385 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CTI29_RS25110 (CTI29_25340) | 22382..23200 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| CTI29_RS25115 (CTI29_25345) | 23197..24345 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| CTI29_RS25120 (CTI29_25350) | 24342..24632 | + | 291 | WP_001299214 | hypothetical protein | traK |
| CTI29_RS25125 (CTI29_25355) | 24647..25198 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| CTI29_RS25130 (CTI29_25360) | 25288..29055 | + | 3768 | WP_023518849 | LPD7 domain-containing protein | - |
| CTI29_RS25135 (CTI29_25365) | 29073..29420 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| CTI29_RS25140 (CTI29_25370) | 29417..30109 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| CTI29_RS25145 (CTI29_25375) | 30120..31103 | + | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| CTI29_RS25150 (CTI29_25380) | 31106..32395 | + | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| CTI29_RS25155 (CTI29_25385) | 32395..33099 | + | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| CTI29_RS25160 (CTI29_25390) | 33099..33626 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| CTI29_RS25165 (CTI29_25395) | 33677..34081 | + | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| CTI29_RS25170 (CTI29_25400) | 34145..34333 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| CTI29_RS25175 (CTI29_25405) | 34317..35117 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| CTI29_RS25180 (CTI29_25410) | 35207..38251 | + | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| CTI29_RS25185 (CTI29_25415) | 38251..38865 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| CTI29_RS25190 (CTI29_25420) | 38832..40034 | + | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| CTI29_RS25195 (CTI29_25425) | 40063..40647 | + | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| CTI29_RS25200 (CTI29_25430) | 40744..42912 | + | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| CTI29_RS25205 (CTI29_25435) | 42983..43645 | + | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CTI29_RS25210 (CTI29_25440) | 43717..43926 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| CTI29_RS27115 | 44318..44494 | + | 177 | WP_001054897 | hypothetical protein | - |
| CTI29_RS27560 | 44559..44654 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| CTI29_RS25220 (CTI29_25450) | 45155..45406 | + | 252 | WP_001291964 | hypothetical protein | - |
| CTI29_RS25225 (CTI29_25455) | 45478..45630 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| CTI29_RS25230 (CTI29_25460) | 45951..46325 | + | 375 | WP_223349261 | hypothetical protein | - |
| CTI29_RS25235 (CTI29_25465) | 46478..47740 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| CTI29_RS25240 (CTI29_25470) | 48064..49209 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| CTI29_RS25245 (CTI29_25475) | 49303..49836 | + | 534 | WP_001221666 | lipocalin family protein | - |
| CTI29_RS25250 (CTI29_25480) | 49833..50150 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CTI29_RS25255 (CTI29_25485) | 50346..51128 | + | 783 | WP_023063753 | protein FinQ | - |
| CTI29_RS25260 (CTI29_25490) | 51435..52643 | + | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| CTI29_RS25265 (CTI29_25495) | 52662..53732 | + | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| CTI29_RS25270 (CTI29_25500) | 53725..56016 | + | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |