T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 527760..537173
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO22_RS20880 (CDO22_20895) | 523003..523728 | - | 726 | WP_014528527 | response regulator | - |
| CDO22_RS36360 (CDO22_20910) | 524747..525052 | - | 306 | WP_011971014 | hypothetical protein | - |
| CDO22_RS20900 (CDO22_20915) | 525052..526617 | - | 1566 | WP_011971015 | IS66 family transposase | - |
| CDO22_RS20905 (CDO22_20920) | 526689..527036 | - | 348 | WP_011971016 | IS66 family insertion sequence element accessory protein TnpB | - |
| CDO22_RS20910 (CDO22_20925) | 527033..527416 | - | 384 | WP_011971017 | transposase | - |
| CDO22_RS20915 (CDO22_20930) | 527760..528800 | - | 1041 | WP_014528525 | P-type DNA transfer ATPase VirB11 | virB11 |
| CDO22_RS20920 (CDO22_20935) | 528840..529958 | - | 1119 | WP_014528524 | type IV secretion system protein VirB10 | virB10 |
| CDO22_RS20925 (CDO22_20940) | 529955..530836 | - | 882 | WP_014528523 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| CDO22_RS20930 (CDO22_20945) | 530833..531546 | - | 714 | WP_014528522 | type IV secretion system protein VirB8 | virB8 |
| CDO22_RS20935 (CDO22_20950) | 531533..531700 | - | 168 | WP_011970875 | type IV secretion system lipoprotein VirB7 | - |
| CDO22_RS20940 (CDO22_20955) | 531733..532620 | - | 888 | WP_014528521 | type IV secretion system protein | virB6 |
| CDO22_RS20945 (CDO22_20960) | 532701..533384 | - | 684 | WP_014528520 | pilin minor subunit VirB5 | traI |
| CDO22_RS20950 (CDO22_20965) | 533398..535767 | - | 2370 | WP_014528519 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| CDO22_RS20955 (CDO22_20970) | 535767..536093 | - | 327 | WP_003537077 | type IV secretion system protein VirB3 | virB3 |
| CDO22_RS20960 (CDO22_20975) | 536090..536452 | - | 363 | WP_014528518 | pilin major subunit VirB2 | virB2 |
| CDO22_RS20965 (CDO22_20980) | 536466..537173 | - | 708 | WP_014528517 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| CDO22_RS35890 | 537382..537540 | + | 159 | WP_170849885 | hypothetical protein | - |
| CDO22_RS20975 (CDO22_20990) | 537692..537883 | - | 192 | Protein_515 | Lrp/AsnC ligand binding domain-containing protein | - |
| CDO22_RS20980 (CDO22_20995) | 537867..538442 | + | 576 | WP_153428644 | type IV secretory system conjugative DNA transfer family protein | - |
| CDO22_RS20985 (CDO22_21000) | 538526..539637 | + | 1112 | Protein_517 | IS256-like element ISRm5 family transposase | - |
| CDO22_RS20990 (CDO22_21005) | 539657..539925 | + | 269 | Protein_518 | hypothetical protein | - |
| CDO22_RS20995 (CDO22_21010) | 540255..541708 | - | 1454 | Protein_519 | PLP-dependent aminotransferase family protein | - |