T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 172786..186618
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| At1D1609_RS29220 (At1D1609_56330) | 171074..171616 | + | 543 | WP_104680634 | conjugative transfer signal peptidase TraF | - |
| At1D1609_RS29225 (At1D1609_56340) | 171606..172769 | + | 1164 | WP_104680635 | conjugal transfer protein TraB | - |
| At1D1609_RS29230 (At1D1609_56350) | 172786..173403 | + | 618 | WP_104680636 | TraH family protein | virB1 |
| At1D1609_RS29235 (At1D1609_56360) | 173635..175200 | + | 1566 | WP_104680637 | Fic family protein | - |
| At1D1609_RS29240 (At1D1609_56370) | 175314..175535 | - | 222 | WP_104680638 | helix-turn-helix transcriptional regulator | - |
| At1D1609_RS29245 (At1D1609_56380) | 175749..176069 | + | 321 | WP_104680639 | transcriptional repressor TraM | - |
| At1D1609_RS29250 (At1D1609_56390) | 176073..176777 | - | 705 | WP_104680640 | autoinducer binding domain-containing protein | - |
| At1D1609_RS29255 (At1D1609_56400) | 177099..178394 | - | 1296 | WP_104680641 | IncP-type conjugal transfer protein TrbI | virB10 |
| At1D1609_RS29260 (At1D1609_56410) | 178406..178846 | - | 441 | WP_104680642 | conjugal transfer protein TrbH | - |
| At1D1609_RS29265 (At1D1609_56420) | 178850..179662 | - | 813 | WP_104680643 | P-type conjugative transfer protein TrbG | virB9 |
| At1D1609_RS29270 (At1D1609_56430) | 179680..180342 | - | 663 | WP_104680644 | conjugal transfer protein TrbF | virB8 |
| At1D1609_RS29275 (At1D1609_56440) | 180362..181543 | - | 1182 | WP_104680645 | P-type conjugative transfer protein TrbL | virB6 |
| At1D1609_RS29280 (At1D1609_56450) | 181537..181737 | - | 201 | WP_104680646 | entry exclusion protein TrbK | - |
| At1D1609_RS29285 (At1D1609_56460) | 181734..182537 | - | 804 | WP_104680647 | P-type conjugative transfer protein TrbJ | virB5 |
| At1D1609_RS29290 (At1D1609_56470) | 182509..184965 | - | 2457 | WP_104680648 | conjugal transfer protein TrbE | virb4 |
| At1D1609_RS29295 (At1D1609_56480) | 184976..185275 | - | 300 | WP_104680649 | conjugal transfer protein TrbD | virB3 |
| At1D1609_RS29300 (At1D1609_56490) | 185268..185651 | - | 384 | WP_104680650 | TrbC/VirB2 family protein | virB2 |
| At1D1609_RS29305 (At1D1609_56500) | 185641..186618 | - | 978 | WP_104680651 | P-type conjugative transfer ATPase TrbB | virB11 |
| At1D1609_RS29310 (At1D1609_56510) | 186629..187252 | - | 624 | WP_104680652 | acyl-homoserine-lactone synthase | - |