T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1218159..1227572
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO23_RS25170 (CDO23_25195) | 1214088..1215779 | + | 1692 | WP_028011681 | type IV secretion system ATPase VirD4 | - |
| CDO23_RS34025 | 1215821..1215997 | - | 177 | WP_153323329 | hypothetical protein | - |
| CDO23_RS25175 (CDO23_25200) | 1216196..1216921 | - | 726 | WP_017263500 | response regulator | - |
| CDO23_RS25190 (CDO23_25215) | 1218159..1219199 | - | 1041 | WP_017263499 | P-type DNA transfer ATPase VirB11 | virB11 |
| CDO23_RS25195 (CDO23_25220) | 1219239..1220357 | - | 1119 | WP_026030558 | type IV secretion system protein VirB10 | virB10 |
| CDO23_RS25200 (CDO23_25225) | 1220354..1221235 | - | 882 | WP_028011683 | P-type conjugative transfer protein VirB9 | virB9 |
| CDO23_RS25205 (CDO23_25230) | 1221232..1221945 | - | 714 | WP_003537093 | type IV secretion system protein VirB8 | virB8 |
| CDO23_RS25210 (CDO23_25235) | 1221932..1222099 | - | 168 | WP_003537091 | type IV secretion system lipoprotein VirB7 | - |
| CDO23_RS25215 (CDO23_25240) | 1222132..1223019 | - | 888 | WP_003537089 | type IV secretion system protein | virB6 |
| CDO23_RS25220 (CDO23_25245) | 1223100..1223783 | - | 684 | WP_003537081 | pilin minor subunit VirB5 | traI |
| CDO23_RS25225 (CDO23_25250) | 1223797..1226166 | - | 2370 | WP_028011684 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| CDO23_RS25230 (CDO23_25255) | 1226166..1226492 | - | 327 | WP_003537077 | type IV secretion system protein VirB3 | virB3 |
| CDO23_RS25235 (CDO23_25260) | 1226489..1226851 | - | 363 | WP_014528518 | pilin major subunit VirB2 | virB2 |
| CDO23_RS25240 (CDO23_25265) | 1226865..1227572 | - | 708 | WP_028011685 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| CDO23_RS25245 (CDO23_25270) | 1227900..1228298 | - | 399 | WP_164820336 | hypothetical protein | - |
| CDO23_RS25250 (CDO23_25275) | 1228357..1228548 | - | 192 | Protein_1181 | Lrp/AsnC ligand binding domain-containing protein | - |
| CDO23_RS25255 (CDO23_25280) | 1228571..1229098 | + | 528 | WP_157718085 | type IV secretory system conjugative DNA transfer family protein | - |
| CDO23_RS25260 (CDO23_25285) | 1229190..1230386 | + | 1197 | WP_015241349 | IS256-like element ISRm5 family transposase | - |
| CDO23_RS25265 (CDO23_25290) | 1230436..1230707 | + | 272 | Protein_1184 | hypothetical protein | - |
| CDO23_RS25270 (CDO23_25295) | 1231034..1232491 | - | 1458 | WP_088218245 | PLP-dependent aminotransferase family protein | - |