T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2949..22310
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5468_RS28735 (L5468_28740) | 1..1105 | - | 1105 | Protein_0 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| L5468_RS28740 (L5468_28745) | 1105..2483 | - | 1379 | Protein_1 | conjugal transfer pilus assembly protein TraH | - |
| L5468_RS28745 (L5468_28750) | 2461..2904 | - | 444 | Protein_2 | F-type conjugal transfer protein TrbF | - |
| L5468_RS28750 (L5468_28755) | 2949..3506 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| L5468_RS28755 (L5468_28760) | 3478..3717 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L5468_RS28760 (L5468_28765) | 3728..4480 | - | 753 | WP_009309874 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| L5468_RS28765 (L5468_28770) | 4501..4827 | - | 327 | WP_004194451 | hypothetical protein | - |
| L5468_RS28770 (L5468_28775) | 4840..5088 | - | 249 | WP_004152675 | hypothetical protein | - |
| L5468_RS28775 (L5468_28780) | 5066..5320 | - | 255 | WP_004195500 | conjugal transfer protein TrbE | - |
| L5468_RS28780 (L5468_28785) | 5352..7307 | - | 1956 | WP_009309873 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| L5468_RS28785 (L5468_28790) | 7366..8004 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| L5468_RS28790 (L5468_28795) | 8017..9006 | - | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| L5468_RS28795 (L5468_28800) | 9003..9392 | - | 390 | WP_004194992 | hypothetical protein | - |
| L5468_RS28800 (L5468_28805) | 9434..10060 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| L5468_RS28805 (L5468_28810) | 10060..10449 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| L5468_RS28810 (L5468_28815) | 10446..13088 | - | 2643 | WP_032454974 | type IV secretion system protein TraC | virb4 |
| L5468_RS28815 (L5468_28820) | 13160..13558 | - | 399 | WP_074184101 | hypothetical protein | - |
| L5468_RS28820 (L5468_28825) | 13936..14340 | - | 405 | WP_004197817 | hypothetical protein | - |
| L5468_RS28825 (L5468_28830) | 14407..14718 | - | 312 | WP_004195240 | hypothetical protein | - |
| L5468_RS28830 (L5468_28835) | 14719..14937 | - | 219 | WP_004195235 | hypothetical protein | - |
| L5468_RS28835 (L5468_28840) | 15043..15453 | - | 411 | WP_004152499 | hypothetical protein | - |
| L5468_RS28840 (L5468_28845) | 15585..16169 | - | 585 | WP_032441881 | type IV conjugative transfer system lipoprotein TraV | traV |
| L5468_RS28845 (L5468_28850) | 16283..17706 | - | 1424 | Protein_22 | F-type conjugal transfer pilus assembly protein TraB | - |
| L5468_RS28850 (L5468_28855) | 17706..18446 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| L5468_RS28855 (L5468_28860) | 18433..18999 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| L5468_RS28860 (L5468_28865) | 19019..19324 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| L5468_RS28865 (L5468_28870) | 19338..19706 | - | 369 | WP_020316649 | type IV conjugative transfer system pilin TraA | - |
| L5468_RS29685 | 19775..19975 | - | 201 | WP_050442686 | TraY domain-containing protein | - |
| L5468_RS28870 (L5468_28875) | 20059..20763 | - | 705 | WP_050442685 | hypothetical protein | - |
| L5468_RS28875 (L5468_28880) | 21001..21393 | - | 393 | WP_020805752 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L5468_RS28880 (L5468_28885) | 21825..22310 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| L5468_RS28885 (L5468_28890) | 22343..22672 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| L5468_RS28890 (L5468_28895) | 22705..23526 | - | 822 | WP_032454971 | DUF932 domain-containing protein | - |
| L5468_RS28895 (L5468_28900) | 24342..24741 | - | 400 | Protein_33 | hypothetical protein | - |