T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 58757..68666
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMED_RS31345 (Smed_6394) | 53870..55345 | - | 1476 | WP_011971098 | DUF1214 domain-containing protein | - |
| SMED_RS31350 (Smed_6395) | 55622..56576 | + | 955 | Protein_64 | LysR family transcriptional regulator | - |
| SMED_RS31355 (Smed_6396) | 56661..58760 | - | 2100 | WP_011971097 | type IV secretory system conjugative DNA transfer family protein | - |
| SMED_RS31360 (Smed_6397) | 58757..59785 | - | 1029 | WP_011971096 | P-type DNA transfer ATPase VirB11 | virB11 |
| SMED_RS31365 (Smed_6398) | 59766..60977 | - | 1212 | WP_011971095 | type IV secretion system protein VirB10 | virB10 |
| SMED_RS31370 (Smed_6399) | 60977..61786 | - | 810 | WP_011971094 | P-type conjugative transfer protein VirB9 | virB9 |
| SMED_RS31375 (Smed_6400) | 61783..62478 | - | 696 | WP_011971093 | type IV secretion system protein | virB8 |
| SMED_RS31380 (Smed_6401) | 62504..63532 | - | 1029 | WP_011971092 | type IV secretion system protein | virB6 |
| SMED_RS31385 (Smed_6402) | 63548..63775 | - | 228 | WP_011971091 | hypothetical protein | - |
| SMED_RS31390 (Smed_6403) | 63765..64466 | - | 702 | WP_011971090 | type IV secretion system protein | - |
| SMED_RS31395 (Smed_6404) | 64478..65566 | - | 1089 | WP_011971089 | lytic transglycosylase domain-containing protein | - |
| SMED_RS31400 (Smed_6405) | 65563..68022 | - | 2460 | WP_011971088 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SMED_RS31405 (Smed_6406) | 68025..68324 | - | 300 | WP_011971087 | VirB3 family type IV secretion system protein | virB3 |
| SMED_RS31410 (Smed_6407) | 68328..68666 | - | 339 | WP_011971086 | TrbC/VirB2 family protein | virB2 |
| SMED_RS31415 (Smed_6408) | 68678..69589 | - | 912 | WP_024312403 | lytic transglycosylase domain-containing protein | - |
| SMED_RS31420 (Smed_6409) | 69812..70420 | + | 609 | WP_011971084 | hypothetical protein | - |
| SMED_RS31425 (Smed_6410) | 70417..70953 | + | 537 | WP_011971083 | succinoglycan biosynthesis protein exoi | - |
| SMED_RS31430 (Smed_6411) | 70950..71651 | + | 702 | WP_011971082 | thermonuclease family protein | - |
| SMED_RS31435 (Smed_6412) | 71652..72050 | + | 399 | WP_011971081 | hypothetical protein | - |
| SMED_RS31440 (Smed_6413) | 72052..72648 | + | 597 | WP_011971080 | hypothetical protein | - |
| SMED_RS31445 (Smed_6414) | 72669..73085 | + | 417 | WP_011971079 | hypothetical protein | - |
| SMED_RS31450 (Smed_6415) | 73168..73503 | - | 336 | WP_024312400 | hypothetical protein | - |