T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47404..56494
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE14_RS24115 | 43435..43668 | - | 234 | WP_001191890 | hypothetical protein | - |
| SE14_RS24120 (SE14_04917) | 43650..44267 | - | 618 | WP_001249395 | hypothetical protein | - |
| SE14_RS24125 (SE14_04918) | 44435..47407 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| SE14_RS24130 (SE14_04919) | 47404..49269 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| SE14_RS24135 (SE14_04920) | 49319..49864 | + | 546 | WP_000228720 | hypothetical protein | - |
| SE14_RS24140 (SE14_04921) | 49821..50450 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| SE14_RS24145 (SE14_04922) | 50460..50906 | + | 447 | WP_000122507 | hypothetical protein | - |
| SE14_RS24150 (SE14_04923) | 50916..51293 | + | 378 | WP_000869297 | hypothetical protein | - |
| SE14_RS24155 (SE14_04924) | 51293..51955 | + | 663 | WP_001231464 | hypothetical protein | - |
| SE14_RS24160 (SE14_04926) | 52291..52656 | + | 366 | WP_001052530 | hypothetical protein | - |
| SE14_RS24165 (SE14_04927) | 52801..53082 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SE14_RS24170 (SE14_04928) | 53079..53705 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SE14_RS24175 (SE14_04929) | 53689..54606 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SE14_RS24180 (SE14_04930) | 54606..55919 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SE14_RS24185 (SE14_04931) | 55916..56494 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SE14_RS24190 (SE14_04932) | 56498..56890 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SE14_RS24195 (SE14_04933) | 57175..58437 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| SE14_RS24200 (SE14_04935) | 58761..59906 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| SE14_RS24205 (SE14_04936) | 60000..60533 | + | 534 | WP_001221666 | lipocalin family protein | - |
| SE14_RS24210 (SE14_04937) | 60530..60847 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SE14_RS28950 | 61104..61469 | + | 366 | Protein_84 | LuxR family transcriptional regulator | - |