T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 71817..98189
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6D13_RS24270 (L6D13_24270) | 71183..71410 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| L6D13_RS24275 (L6D13_24275) | 71410..71808 | + | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| L6D13_RS24280 (L6D13_24280) | 71817..73970 | - | 2154 | WP_000009324 | type IV conjugative transfer system coupling protein TraD | virb4 |
| L6D13_RS24285 (L6D13_24285) | 74223..74954 | - | 732 | WP_023565183 | conjugal transfer complement resistance protein TraT | - |
| L6D13_RS24290 (L6D13_24290) | 74986..75483 | - | 498 | WP_000605857 | entry exclusion protein | - |
| L6D13_RS24295 (L6D13_24295) | 75499..78321 | - | 2823 | WP_001007018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| L6D13_RS24300 (L6D13_24300) | 78318..79691 | - | 1374 | WP_236932594 | conjugal transfer pilus assembly protein TraH | traH |
| L6D13_RS24305 (L6D13_24305) | 79691..80071 | - | 381 | WP_001389370 | F-type conjugal transfer protein TrbF | - |
| L6D13_RS24310 (L6D13_24310) | 80058..80399 | - | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| L6D13_RS24315 (L6D13_24315) | 80329..80874 | - | 546 | WP_000059851 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| L6D13_RS24320 (L6D13_24320) | 80861..81145 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L6D13_RS24325 (L6D13_24325) | 81226..81540 | + | 315 | WP_001324103 | hypothetical protein | - |
| L6D13_RS24330 (L6D13_24330) | 81542..81889 | - | 348 | WP_001287910 | conjugal transfer protein TrbA | - |
| L6D13_RS24335 (L6D13_24335) | 81905..82648 | - | 744 | WP_001030377 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| L6D13_RS24340 (L6D13_24340) | 82641..82898 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| L6D13_RS24345 (L6D13_24345) | 82925..84733 | - | 1809 | WP_000821838 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| L6D13_RS24350 (L6D13_24350) | 84730..85368 | - | 639 | WP_000777700 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| L6D13_RS24355 (L6D13_24355) | 85377..86369 | - | 993 | WP_000830181 | conjugal transfer pilus assembly protein TraU | traU |
| L6D13_RS24360 (L6D13_24360) | 86366..86998 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| L6D13_RS24365 (L6D13_24365) | 86995..87381 | - | 387 | WP_000099686 | type-F conjugative transfer system protein TrbI | - |
| L6D13_RS24370 (L6D13_24370) | 87378..90005 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| L6D13_RS24375 (L6D13_24375) | 90165..90386 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| L6D13_RS24380 (L6D13_24380) | 90521..91036 | - | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| L6D13_RS24385 (L6D13_24385) | 91033..91284 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| L6D13_RS24390 (L6D13_24390) | 91296..91493 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| L6D13_RS24395 (L6D13_24395) | 91480..92070 | - | 591 | WP_001376242 | conjugal transfer pilus-stabilizing protein TraP | - |
| L6D13_RS24400 (L6D13_24400) | 92060..93487 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| L6D13_RS24405 (L6D13_24405) | 93487..94215 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| L6D13_RS24410 (L6D13_24410) | 94202..94768 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| L6D13_RS24415 (L6D13_24415) | 94790..95101 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| L6D13_RS24420 (L6D13_24420) | 95116..95481 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| L6D13_RS24425 (L6D13_24425) | 95514..95909 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| L6D13_RS24430 (L6D13_24430) | 96008..96696 | - | 689 | Protein_97 | conjugal transfer transcriptional regulator TraJ | - |
| L6D13_RS24435 (L6D13_24435) | 96883..97266 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L6D13_RS24440 (L6D13_24440) | 97599..98189 | + | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | - |
| L6D13_RS24445 (L6D13_24445) | 98486..99307 | - | 822 | WP_001234426 | DUF932 domain-containing protein | - |
| L6D13_RS24450 (L6D13_24450) | 99425..99712 | - | 288 | WP_236932593 | hypothetical protein | - |
| L6D13_RS24455 (L6D13_24455) | 99737..99943 | - | 207 | WP_000547968 | hypothetical protein | - |
| L6D13_RS24460 (L6D13_24460) | 100013..100185 | + | 173 | Protein_103 | hypothetical protein | - |
| L6D13_RS24465 (L6D13_24465) | 100183..100413 | - | 231 | WP_071586998 | hypothetical protein | - |
| L6D13_RS24470 (L6D13_24470) | 100633..100758 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| L6D13_RS24475 (L6D13_24475) | 100700..100849 | - | 150 | Protein_106 | plasmid maintenance protein Mok | - |
| L6D13_RS24480 (L6D13_24480) | 100871..101059 | + | 189 | WP_001299721 | hypothetical protein | - |
| L6D13_RS24485 (L6D13_24485) | 101028..101790 | - | 763 | Protein_108 | plasmid SOS inhibition protein A | - |
| L6D13_RS24490 (L6D13_24490) | 101787..102221 | - | 435 | WP_000845936 | conjugation system SOS inhibitor PsiB | - |
| L6D13_RS24495 (L6D13_24495) | 102276..102473 | - | 198 | Protein_110 | hypothetical protein | - |
| L6D13_RS24500 (L6D13_24500) | 102501..102734 | - | 234 | WP_000005990 | DUF905 family protein | - |