T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12930..23607
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_13 | 8007..8435 | - | 429 | CAJ15571 | KlcA protein | - |
| Locus_14 | 8604..8873 | + | 270 | CAJ15572 | hypothetical protein | - |
| Locus_15 | 8870..9184 | + | 315 | CAJ15573 | hypothetical protein | - |
| Locus_16 | 10536..11756 | - | 1221 | CAJ15574 | long form TrfA replication protein | - |
| Locus_17 | 10536..11390 | - | 855 | CAJ15575 | short form TrfA replication protein | - |
| Locus_18 | 11803..12144 | - | 342 | CAJ15576 | SSB single stranded DNA binding protein | - |
| Locus_19 | 12258..12620 | + | 363 | CAJ15577 | TrbA repressor protein | - |
| Locus_20 | 12930..13892 | + | 963 | CAJ15589 | TrbB protein | virB11 |
| Locus_21 | 13909..14373 | + | 465 | CAJ15590 | TrbC protein | virB2 |
| Locus_22 | 14377..14688 | + | 312 | CAJ15591 | TrbD protein | virB3 |
| Locus_23 | 14685..17243 | + | 2559 | CAJ15592 | TrbE protein | virb4 |
| Locus_24 | 17240..18022 | + | 783 | CAJ15593 | TrbF protein | virB8 |
| Locus_25 | 18019..18939 | + | 921 | CAJ15594 | TrbG protein | virB9 |
| Locus_26 | 18942..19430 | + | 489 | CAJ15595 | TrbH protein | - |
| Locus_27 | 19435..20856 | + | 1422 | CAJ15596 | TrbI protein | virB10 |
| Locus_28 | 20877..21641 | + | 765 | CAJ15597 | TrbJ protein | virB5 |
| Locus_29 | 21651..21878 | + | 228 | CAJ15598 | TrbK entry exclusion protein | - |
| Locus_30 | 21889..23607 | + | 1719 | CAJ15599 | TrbL protein | virB6 |
| Locus_31 | 23625..24212 | + | 588 | CAJ15600 | TrbM protein | - |
| Locus_32 | 24226..24861 | + | 636 | CAJ15601 | TrbN protein | - |
| Locus_33 | 24890..25156 | + | 267 | CAJ15602 | TrbO protein | - |
| Locus_34 | 25156..25854 | + | 699 | CAJ15603 | TrbP protein | - |
| Locus_35 | 25870..26301 | + | 432 | CAJ15604 | Upf30.5 protein | - |
| Locus_36 | 26410..27084 | + | 675 | CAJ15605 | Upf31.0 putative adenine methylase | - |
| Locus_37 | 27086..27745 | - | 660 | CAJ15606 | ParA resolvase | - |
| Locus_38 | 28071..28505 | - | 435 | CAJ15607 | MerR-1 protein | - |