T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3771..25650
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_0 | 393..776 | + | 384 | AAM90702 | TraM | - |
| Locus_1 | 1072..1521 | + | 450 | AAM90701 | TraJ | - |
| Locus_2 | 3410..3769 | + | 360 | AAM90703 | TraA | - |
| Locus_3 | 3771..4076 | + | 306 | AAM90704 | TraL | traL |
| Locus_4 | 4096..4659 | + | 564 | AAM90705 | TraE | traE |
| Locus_5 | 4649..5389 | + | 741 | AAM90706 | TraK | traK |
| Locus_6 | 5376..6737 | + | 1362 | AAM90707 | TraB | traB |
| Locus_7 | 6806..7072 | + | 267 | AAM90708 | TraR | - |
| Locus_8 | 7076..7261 | + | 186 | AAM90709 | orfX1 | - |
| Locus_9 | 7245..7535 | + | 291 | AAM90710 | orfX2 | - |
| Locus_10 | 7532..7978 | + | 447 | AAM90711 | orfX3 | - |
| Locus_11 | 7997..8611 | + | 615 | AAM90712 | TraV | traV |
| Locus_12 | 8622..11213 | + | 2592 | AAM90713 | TraC | virb4 |
| Locus_13 | 11210..11674 | + | 465 | AAM90714 | TrbI | - |
| Locus_14 | 11674..12309 | + | 636 | AAM90715 | TraW | traW |
| Locus_15 | 12306..13301 | + | 996 | AAM90716 | TraU | traU |
| Locus_16 | 13312..13680 | + | 369 | AAM90717 | orfX4 | - |
| Locus_17 | 13677..14288 | + | 612 | AAM90718 | TrbC | trbC |
| Locus_18 | 14285..16138 | + | 1854 | AAM90719 | TraN | traN |
| Locus_19 | 16135..16914 | + | 780 | AAM90720 | TraF | traF |
| Locus_20 | 16936..17547 | + | 612 | AAM90721 | TrbB | traF |
| Locus_21 | 17547..18908 | + | 1362 | AAM90722 | TraH | traH |
| Locus_22 | 18910..21744 | + | 2835 | AAM90723 | TraG | traG |
| Locus_23 | 21815..22375 | + | 561 | AAM90724 | TraS | - |
| Locus_24 | 22552..23289 | + | 738 | AAM90725 | TraT | - |
| Locus_25 | 23440..25650 | + | 2211 | AAM90726 | TraD | virb4 |