T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 106345..117665
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN550_RS00650 (SEEN550_00620) | 102376..102609 | - | 234 | WP_001191890 | hypothetical protein | - |
| SEEN550_RS00655 (SEEN550_00625) | 102591..103208 | - | 618 | WP_001249395 | hypothetical protein | - |
| SEEN550_RS00660 (SEEN550_00630) | 103376..106348 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| SEEN550_RS00665 (SEEN550_00635) | 106345..108210 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| SEEN550_RS00670 (SEEN550_00640) | 108260..108805 | + | 546 | WP_000228720 | hypothetical protein | - |
| SEEN550_RS00675 (SEEN550_00645) | 108762..109391 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| SEEN550_RS00680 (SEEN550_00650) | 109401..109847 | + | 447 | WP_000122507 | hypothetical protein | - |
| SEEN550_RS00685 (SEEN550_00655) | 109857..110234 | + | 378 | WP_000869297 | hypothetical protein | - |
| SEEN550_RS00690 (SEEN550_00660) | 110234..110896 | + | 663 | WP_001231464 | hypothetical protein | - |
| SEEN550_RS00695 (SEEN550_00670) | 111232..111597 | + | 366 | WP_001052530 | hypothetical protein | - |
| SEEN550_RS00700 (SEEN550_00675) | 111742..112023 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SEEN550_RS00705 (SEEN550_00680) | 112020..112646 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SEEN550_RS00710 (SEEN550_00685) | 112630..113547 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SEEN550_RS00715 (SEEN550_00690) | 113547..114860 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SEEN550_RS00720 (SEEN550_00695) | 114857..115435 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEEN550_RS00725 (SEEN550_00700) | 115439..115831 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SEEN550_RS00730 | 116116..117075 | + | 960 | Protein_138 | IS1380-like element ISEcp1 family transposase | - |
| SEEN550_RS00735 (SEEN550_00710) | 117069..117776 | - | 708 | WP_000637385 | conjugal transfer protein TraC | - |
| SEEN550_RS00740 (SEEN550_00715) | 117773..118480 | - | 708 | WP_001259346 | DsbC family protein | - |