T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 86668..111859
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6445_RS28840 | 82693..82926 | - | 234 | WP_143474954 | hypothetical protein | - |
| L6445_RS28845 (PDTA9734_57070) | 82908..83525 | - | 618 | WP_143474953 | hypothetical protein | - |
| L6445_RS28850 (PDTA9734_57080) | 83693..86671 | + | 2979 | WP_143474952 | MobH family relaxase | - |
| L6445_RS28855 (PDTA9734_57090) | 86668..88533 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| L6445_RS28860 (PDTA9734_57100) | 88583..89128 | + | 546 | WP_000228720 | hypothetical protein | - |
| L6445_RS28865 (PDTA9734_57110) | 89085..89714 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| L6445_RS28870 (PDTA9734_57120) | 89724..90170 | + | 447 | WP_000122506 | hypothetical protein | - |
| L6445_RS28875 (PDTA9734_57130) | 90180..90557 | + | 378 | WP_000869261 | hypothetical protein | - |
| L6445_RS28880 (PDTA9734_57140) | 90557..91219 | + | 663 | WP_001231463 | hypothetical protein | - |
| L6445_RS28885 (PDTA9734_57160) | 91555..91920 | + | 366 | WP_001052531 | hypothetical protein | - |
| L6445_RS28890 (PDTA9734_57170) | 92065..92346 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| L6445_RS28895 (PDTA9734_57180) | 92343..92969 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| L6445_RS28900 (PDTA9734_57190) | 92953..93870 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| L6445_RS28905 (PDTA9734_57200) | 93870..95183 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| L6445_RS28910 (PDTA9734_57210) | 95180..95758 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| L6445_RS28915 (PDTA9734_57220) | 95762..96154 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| L6445_RS28920 (PDTA9734_57230) | 96355..101886 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| L6445_RS28925 (PDTA9734_57240) | 102035..102742 | + | 708 | WP_001259347 | DsbC family protein | - |
| L6445_RS28930 (PDTA9734_57250) | 102739..105186 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| L6445_RS28935 (PDTA9734_57260) | 105201..105518 | + | 318 | WP_000351984 | hypothetical protein | - |
| L6445_RS28940 (PDTA9734_57270) | 105515..106045 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| L6445_RS28945 (PDTA9734_57280) | 106008..107273 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| L6445_RS28950 (PDTA9734_57290) | 107270..107941 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| L6445_RS28955 (PDTA9734_57300) | 107941..108945 | + | 1005 | WP_043940352 | TraU family protein | traU |
| L6445_RS28960 (PDTA9734_57310) | 109061..111859 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| L6445_RS28965 (PDTA9734_57320) | 111898..112758 | - | 861 | WP_000709517 | hypothetical protein | - |
| L6445_RS28970 (PDTA9734_57330) | 112881..113522 | - | 642 | WP_000796664 | hypothetical protein | - |
| L6445_RS28975 (PDTA9734_57340) | 113816..114136 | + | 321 | WP_000547566 | hypothetical protein | - |
| L6445_RS28980 (PDTA9734_57350) | 114440..114625 | + | 186 | WP_001186917 | hypothetical protein | - |
| L6445_RS28985 (PDTA9734_57360) | 114845..115813 | + | 969 | WP_000085162 | AAA family ATPase | - |
| L6445_RS28990 (PDTA9734_57370) | 115824..116732 | + | 909 | WP_000739139 | hypothetical protein | - |