T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11844..40299
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL122_RS00055 (OAKAGGBL_00011) | 11844..14126 | - | 2283 | WP_110133658 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LL122_RS00060 (OAKAGGBL_00012) | 14253..14942 | - | 690 | WP_014343485 | hypothetical protein | - |
| LL122_RS00065 (OAKAGGBL_00013) | 15135..15866 | - | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LL122_RS00070 (OAKAGGBL_00014) | 16052..16585 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| LL122_RS00075 (OAKAGGBL_00015) | 16588..19437 | - | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LL122_RS00080 (OAKAGGBL_00016) | 19437..20816 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| LL122_RS00085 (OAKAGGBL_00017) | 20794..21237 | - | 444 | WP_014343488 | F-type conjugal transfer protein TrbF | - |
| LL122_RS00090 (OAKAGGBL_00018) | 21283..21840 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LL122_RS00095 (OAKAGGBL_00019) | 21812..22051 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LL122_RS00100 (OAKAGGBL_00020) | 22062..22814 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LL122_RS00105 (OAKAGGBL_00021) | 22835..23161 | - | 327 | WP_013214030 | hypothetical protein | - |
| LL122_RS00110 (OAKAGGBL_00022) | 23174..23422 | - | 249 | WP_013214029 | hypothetical protein | - |
| LL122_RS00115 (OAKAGGBL_00023) | 23400..23654 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LL122_RS00120 (OAKAGGBL_00024) | 23686..25641 | - | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LL122_RS00125 (OAKAGGBL_00025) | 25700..26338 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LL122_RS00130 (OAKAGGBL_00026) | 26351..27340 | - | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| LL122_RS00135 (OAKAGGBL_00027) | 27337..27738 | - | 402 | WP_004194979 | hypothetical protein | - |
| LL122_RS00140 (OAKAGGBL_00028) | 27773..28408 | - | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| LL122_RS00145 (OAKAGGBL_00029) | 28408..28797 | - | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| LL122_RS00150 (OAKAGGBL_00030) | 28797..31436 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| LL122_RS00155 (OAKAGGBL_00031) | 31508..31906 | - | 399 | WP_014343490 | hypothetical protein | - |
| LL122_RS00160 (OAKAGGBL_00032) | 32283..32687 | - | 405 | WP_004197817 | hypothetical protein | - |
| LL122_RS00165 (OAKAGGBL_00033) | 32754..33065 | - | 312 | WP_013214022 | hypothetical protein | - |
| LL122_RS00170 (OAKAGGBL_00034) | 33066..33284 | - | 219 | WP_004195468 | hypothetical protein | - |
| LL122_RS00175 (OAKAGGBL_00035) | 33607..34191 | - | 585 | WP_014343493 | type IV conjugative transfer system lipoprotein TraV | traV |
| LL122_RS00180 (OAKAGGBL_00036) | 34263..35687 | - | 1425 | WP_013214020 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LL122_RS00185 (OAKAGGBL_00037) | 35687..36427 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| LL122_RS00190 (OAKAGGBL_00038) | 36414..36980 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LL122_RS00195 (OAKAGGBL_00039) | 37000..37305 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LL122_RS00200 (OAKAGGBL_00040) | 37319..37687 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LL122_RS00205 | 37749..37955 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LL122_RS00210 (OAKAGGBL_00041) | 38070..38807 | - | 738 | WP_013214018 | conjugal transfer protein TrbJ | - |
| LL122_RS00215 (OAKAGGBL_00042) | 39007..39423 | - | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LL122_RS00220 (OAKAGGBL_00043) | 39814..40299 | + | 486 | WP_014343495 | transglycosylase SLT domain-containing protein | virB1 |
| LL122_RS00225 (OAKAGGBL_00044) | 40332..40661 | - | 330 | WP_013214015 | DUF5983 family protein | - |
| LL122_RS00230 (OAKAGGBL_00045) | 40694..41515 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LL122_RS00235 (OAKAGGBL_00046) | 42344..42448 | - | 105 | Protein_46 | transcriptional regulator | - |
| LL122_RS00240 (OAKAGGBL_00047) | 42452..42730 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LL122_RS00245 (OAKAGGBL_00048) | 42720..43040 | - | 321 | WP_014343498 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LL122_RS00250 (OAKAGGBL_00049) | 43121..43345 | - | 225 | WP_014343499 | hypothetical protein | - |
| LL122_RS00255 (OAKAGGBL_00050) | 43356..43568 | - | 213 | WP_014343500 | hypothetical protein | - |
| LL122_RS00260 (OAKAGGBL_00051) | 43629..43985 | - | 357 | WP_014343501 | hypothetical protein | - |
| LL122_RS00265 (OAKAGGBL_00052) | 44826..45143 | - | 318 | WP_014343505 | hypothetical protein | - |