T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 104545..131432
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL412_RS00575 (NL412_000575) | 99654..100145 | - | 492 | WP_228340195 | hypothetical protein | - |
| NL412_RS00580 (NL412_000580) | 100225..100527 | + | 303 | Protein_115 | hypothetical protein | - |
| NL412_RS00585 (NL412_000585) | 100582..101016 | + | 435 | WP_000845949 | conjugation system SOS inhibitor PsiB | - |
| NL412_RS00590 (NL412_000590) | 101013..101775 | + | 763 | Protein_117 | plasmid SOS inhibition protein A | - |
| NL412_RS00595 (NL412_000595) | 101954..102103 | + | 150 | Protein_118 | plasmid maintenance protein Mok | - |
| NL412_RS00600 (NL412_000600) | 102045..102170 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| NL412_RS00605 (NL412_000605) | 102473..102722 | - | 250 | Protein_120 | hypothetical protein | - |
| NL412_RS00610 (NL412_000610) | 103023..103310 | + | 288 | WP_000107526 | hypothetical protein | - |
| NL412_RS00615 (NL412_000615) | 103429..104250 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| NL412_RS00620 (NL412_000620) | 104545..105147 | - | 603 | WP_077786836 | transglycosylase SLT domain-containing protein | virB1 |
| NL412_RS00625 (NL412_000625) | 105478..105861 | + | 384 | WP_023063829 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NL412_RS00630 (NL412_000630) | 106055..106747 | + | 693 | WP_001403354 | PAS domain-containing protein | - |
| NL412_RS00635 (NL412_000635) | 106835..107062 | + | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| NL412_RS00640 (NL412_000640) | 107096..107458 | + | 363 | WP_044692361 | type IV conjugative transfer system pilin TraA | - |
| NL412_RS00645 (NL412_000645) | 107463..107774 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| NL412_RS00650 (NL412_000650) | 107796..108362 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| NL412_RS00655 (NL412_000655) | 108349..109077 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| NL412_RS00660 (NL412_000660) | 109077..110528 | + | 1452 | WP_000146647 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NL412_RS00665 (NL412_000665) | 110518..111084 | + | 567 | WP_244588479 | conjugal transfer pilus-stabilizing protein TraP | - |
| NL412_RS00670 (NL412_000670) | 111071..111382 | + | 312 | WP_001057272 | conjugal transfer protein TrbD | - |
| NL412_RS00675 (NL412_000675) | 111382..111897 | + | 516 | WP_032277441 | type IV conjugative transfer system lipoprotein TraV | traV |
| NL412_RS00680 (NL412_000680) | 112032..112253 | + | 222 | WP_001278694 | conjugal transfer protein TraR | - |
| NL412_RS00685 (NL412_000685) | 112413..115040 | + | 2628 | WP_097514781 | type IV secretion system protein TraC | virb4 |
| NL412_RS00690 (NL412_000690) | 115037..115423 | + | 387 | WP_032277443 | type-F conjugative transfer system protein TrbI | - |
| NL412_RS00695 (NL412_000695) | 115420..116052 | + | 633 | WP_032277445 | type-F conjugative transfer system protein TraW | traW |
| NL412_RS00700 (NL412_000700) | 116049..117041 | + | 993 | WP_032277446 | conjugal transfer pilus assembly protein TraU | traU |
| NL412_RS00705 (NL412_000705) | 117071..117376 | + | 306 | WP_000224413 | hypothetical protein | - |
| NL412_RS00710 (NL412_000710) | 117385..118023 | + | 639 | WP_123009964 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NL412_RS00715 (NL412_000715) | 118020..119870 | + | 1851 | WP_000821866 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NL412_RS00720 (NL412_000720) | 119897..120154 | + | 258 | WP_123009963 | conjugal transfer protein TrbE | - |
| NL412_RS00725 (NL412_000725) | 120147..120890 | + | 744 | WP_001030370 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NL412_RS00730 (NL412_000730) | 120906..121244 | + | 339 | WP_001287901 | conjugal transfer protein TrbA | - |
| NL412_RS00735 (NL412_000735) | 121371..121655 | + | 285 | WP_000623730 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NL412_RS00740 (NL412_000740) | 121642..122187 | + | 546 | WP_000059829 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NL412_RS00745 (NL412_000745) | 122117..122464 | + | 348 | WP_071571857 | P-type conjugative transfer protein TrbJ | - |
| NL412_RS00750 (NL412_000750) | 122445..122836 | + | 392 | Protein_149 | F-type conjugal transfer protein TrbF | - |
| NL412_RS00755 (NL412_000755) | 122823..124196 | + | 1374 | WP_001403427 | conjugal transfer pilus assembly protein TraH | traH |
| NL412_RS00760 (NL412_000760) | 124193..127015 | + | 2823 | WP_089634351 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NL412_RS00765 (NL412_000765) | 127031..127516 | + | 486 | WP_097514778 | surface exclusion protein | - |
| NL412_RS00770 (NL412_000770) | 127565..128296 | + | 732 | WP_001403424 | conjugal transfer complement resistance protein TraT | - |
| NL412_RS00775 (NL412_000775) | 128500..128979 | + | 480 | WP_001473214 | hypothetical protein | - |
| NL412_RS00780 (NL412_000780) | 129261..131432 | + | 2172 | WP_097514777 | type IV conjugative transfer system coupling protein TraD | virb4 |