T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6296..28128
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXG36_RS00015 (D616_p02) | 2148..3581 | - | 1434 | WP_001288433 | DNA cytosine methyltransferase | - |
| HXG36_RS00020 | 3675..3946 | + | 272 | Protein_3 | IS1 family transposase | - |
| HXG36_RS00025 (D616_p04) | 3966..4163 | - | 198 | WP_013188474 | hypothetical protein | - |
| HXG36_RS00030 (D616_p25) | 4168..4815 | - | 648 | WP_001532074 | restriction endonuclease | - |
| HXG36_RS00035 (D616_p27) | 4865..5098 | - | 234 | WP_001191790 | hypothetical protein | - |
| HXG36_RS00040 (D616_p28) | 5212..5526 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HXG36_RS00045 (D616_p37) | 5489..5866 | - | 378 | WP_000504250 | hypothetical protein | - |
| HXG36_RS00050 (D616_p32) | 5882..6253 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HXG36_RS00055 (D616_p08) | 6296..7030 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| HXG36_RS00060 (D616_p33) | 7039..7320 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HXG36_RS00065 (D616_p07) | 7330..7623 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| HXG36_RS00070 (D616_p18) | 7673..7990 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HXG36_RS00075 (D616_p17) | 7990..10590 | + | 2601 | WP_001200711 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HXG36_RS00080 (D616_p16) | 10608..11321 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| HXG36_RS00085 (D616_p39) | 11329..11556 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| HXG36_RS00090 (D616_p15) | 11572..12612 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| HXG36_RS00095 (D616_p06) | 12683..12841 | + | 159 | WP_012561180 | hypothetical protein | - |
| HXG36_RS00100 (D616_p14) | 12831..13529 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HXG36_RS00105 (D616_p05) | 13540..14424 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HXG36_RS00110 (D616_p13) | 14424..15584 | + | 1161 | WP_000101712 | type IV secretion system protein VirB10 | virB10 |
| HXG36_RS00115 (D616_p12) | 15626..16621 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HXG36_RS00120 (D616_p31) | 16621..17154 | + | 534 | WP_000731968 | phospholipase D family protein | - |
| HXG36_RS00125 (D616_p19) | 17323..18837 | - | 1515 | Protein_24 | Tn3-like element TnAs1 family transposase | - |
| HXG36_RS00130 (D616_p21) | 18903..19607 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HXG36_RS00135 (D616_p26) | 19800..20444 | - | 645 | WP_012954666 | quinolone resistance pentapeptide repeat protein QnrB19 | - |
| HXG36_RS00140 | 20538..20687 | - | 150 | Protein_27 | helix-turn-helix domain-containing protein | - |
| HXG36_RS00145 (D616_p20) | 20782..21486 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HXG36_RS00150 (D616_p30) | 21635..22510 | + | 876 | WP_000983082 | methyl-accepting chemotaxis protein | - |
| HXG36_RS00155 (D616_p38) | 22743..23369 | - | 627 | WP_000434930 | DUF6710 family protein | - |
| HXG36_RS00160 (D616_p11) | 23369..26599 | - | 3231 | WP_000884351 | MobF family relaxase | - |
| HXG36_RS00165 (D616_p10) | 26599..28128 | - | 1530 | WP_000342688 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HXG36_RS00170 (D616_p09) | 28130..28546 | - | 417 | WP_001532083 | hypothetical protein | - |
| HXG36_RS00260 | 29059..29478 | + | 420 | WP_000802909 | plasmid stabilization protein StbA | - |
| HXG36_RS00180 (D616_p23) | 29487..30203 | + | 717 | WP_000861577 | StbB family protein | - |
| HXG36_RS00185 (D616_p22) | 30205..30573 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| HXG36_RS00190 (D616_p29) | 30755..31099 | + | 345 | WP_000999874 | hypothetical protein | - |
| HXG36_RS00195 (D616_p40) | 31210..31530 | - | 321 | WP_000211832 | protein CcgAII | - |
| HXG36_RS00200 (D616_p44) | 31585..31764 | - | 180 | WP_000214483 | protein CcgAI | - |
| HXG36_RS00205 (D616_p45) | 32596..33105 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |