T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6327..24117
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL417_RS00480 (NL417_000480) | 1969..2853 | - | 885 | WP_023187082 | replication protein RepA | - |
| NL417_RS00485 (NL417_000485) | 2886..3470 | - | 585 | WP_021536796 | recombinase family protein | - |
| NL417_RS00490 (NL417_000490) | 3922..4167 | + | 246 | WP_021536799 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NL417_RS00495 (NL417_000495) | 4179..4436 | + | 258 | WP_046082576 | hypothetical protein | - |
| NL417_RS00500 (NL417_000500) | 4426..4752 | + | 327 | WP_016240388 | endoribonuclease MazF | - |
| NL417_RS00505 (NL417_000505) | 4761..5198 | + | 438 | WP_255055251 | hypothetical protein | - |
| NL417_RS00510 (NL417_000510) | 5224..5460 | - | 237 | WP_042041953 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| NL417_RS00515 (NL417_000515) | 5626..6351 | - | 726 | WP_224132007 | restriction endonuclease | - |
| NL417_RS00520 (NL417_000520) | 6327..6641 | - | 315 | WP_023223516 | hypothetical protein | tfc15 |
| NL417_RS00525 (NL417_000525) | 6644..6961 | - | 318 | WP_023223517 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NL417_RS00530 (NL417_000530) | 6966..7403 | - | 438 | WP_023187074 | hypothetical protein | - |
| NL417_RS00535 (NL417_000535) | 7415..7651 | - | 237 | WP_021536804 | H-NS histone family protein | - |
| NL417_RS00540 (NL417_000540) | 7714..8454 | + | 741 | WP_042041934 | lytic transglycosylase domain-containing protein | virB1 |
| NL417_RS00545 (NL417_000545) | 8477..8794 | + | 318 | WP_001267114 | hypothetical protein | - |
| NL417_RS00550 (NL417_000550) | 8778..9068 | + | 291 | WP_023223518 | TrbC/VirB2 family protein | virB2 |
| NL417_RS00555 (NL417_000555) | 9120..9434 | + | 315 | WP_001053888 | VirB3 family type IV secretion system protein | virB3 |
| NL417_RS00560 (NL417_000560) | 9734..12064 | + | 2331 | WP_264821810 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| NL417_RS00565 (NL417_000565) | 12074..12781 | + | 708 | WP_023187073 | type IV secretion system protein | virB5 |
| NL417_RS00570 (NL417_000570) | 12785..13021 | + | 237 | WP_000733633 | EexN family lipoprotein | - |
| NL417_RS00575 (NL417_000575) | 13076..14083 | + | 1008 | WP_170879277 | type IV secretion system protein | virB6 |
| NL417_RS00580 (NL417_000580) | 14178..14348 | + | 171 | WP_021536809 | hypothetical protein | - |
| NL417_RS00585 (NL417_000585) | 14351..15067 | + | 717 | WP_000914645 | type IV secretion system protein | virB8 |
| NL417_RS00590 (NL417_000590) | 15070..15957 | + | 888 | WP_000744355 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| NL417_RS00595 (NL417_000595) | 15954..17108 | + | 1155 | WP_001224296 | type IV secretion system protein VirB10 | virB10 |
| NL417_RS00600 (NL417_000600) | 17101..18132 | + | 1032 | WP_000138004 | P-type DNA transfer ATPase VirB11 | virB11 |
| NL417_RS00605 (NL417_000605) | 18095..18649 | + | 555 | WP_000616063 | phospholipase D family protein | - |
| NL417_RS00610 (NL417_000610) | 18662..19144 | + | 483 | WP_047051477 | GNAT family protein | - |
| NL417_RS00615 (NL417_000615) | 19156..19350 | + | 195 | WP_046082581 | hypothetical protein | - |
| NL417_RS00620 (NL417_000620) | 19628..22537 | - | 2910 | WP_000932317 | MobF family relaxase | - |
| NL417_RS00625 (NL417_000625) | 22540..24117 | - | 1578 | WP_001001035 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| NL417_RS00630 (NL417_000630) | 24110..24457 | - | 348 | WP_001139329 | hypothetical protein | - |
| NL417_RS00635 (NL417_000635) | 24944..25378 | + | 435 | WP_021544362 | hypothetical protein | - |
| NL417_RS00640 (NL417_000640) | 25391..26101 | + | 711 | WP_021544361 | StbB family protein | - |
| NL417_RS00645 (NL417_000645) | 26103..26471 | + | 369 | WP_015345231 | plasmid stabilization protein StbC | - |
| NL417_RS00650 (NL417_000650) | 26685..27455 | + | 771 | WP_021536818 | SprT-like domain-containing protein | - |
| NL417_RS00655 (NL417_000655) | 27496..27684 | - | 189 | WP_001001010 | hypothetical protein | - |
| NL417_RS00660 (NL417_000660) | 27689..27946 | - | 258 | WP_021536820 | hypothetical protein | - |
| NL417_RS00665 (NL417_000665) | 28019..28174 | - | 156 | WP_021536821 | hypothetical protein | - |
| NL417_RS00670 (NL417_000670) | 28278..28460 | - | 183 | WP_042113821 | hypothetical protein | - |
| NL417_RS00675 (NL417_000675) | 28517..28759 | - | 243 | WP_024249959 | hypothetical protein | - |
| NL417_RS00680 (NL417_000680) | 28814..29101 | - | 288 | WP_001098466 | hypothetical protein | - |