T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5065..22855
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL406_RS00470 (NL406_000470) | 81..368 | + | 288 | WP_001098466 | hypothetical protein | - |
| NL406_RS00475 (NL406_000475) | 423..665 | + | 243 | WP_024249959 | hypothetical protein | - |
| NL406_RS00480 (NL406_000480) | 722..904 | + | 183 | WP_042113821 | hypothetical protein | - |
| NL406_RS00485 (NL406_000485) | 1008..1163 | + | 156 | WP_021536821 | hypothetical protein | - |
| NL406_RS00490 (NL406_000490) | 1236..1493 | + | 258 | WP_021536820 | hypothetical protein | - |
| NL406_RS00495 (NL406_000495) | 1498..1686 | + | 189 | WP_001001010 | hypothetical protein | - |
| NL406_RS00500 (NL406_000500) | 1727..2497 | - | 771 | WP_021536818 | SprT-like domain-containing protein | - |
| NL406_RS00505 (NL406_000505) | 2711..3079 | - | 369 | WP_015345231 | plasmid stabilization protein StbC | - |
| NL406_RS00510 (NL406_000510) | 3081..3791 | - | 711 | WP_021544361 | StbB family protein | - |
| NL406_RS00515 (NL406_000515) | 3804..4238 | - | 435 | WP_021544362 | hypothetical protein | - |
| NL406_RS00520 (NL406_000520) | 4725..5072 | + | 348 | WP_001139329 | hypothetical protein | - |
| NL406_RS00525 (NL406_000525) | 5065..6642 | + | 1578 | WP_001001035 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| NL406_RS00530 (NL406_000530) | 6645..9554 | + | 2910 | WP_000932317 | MobF family relaxase | - |
| NL406_RS00535 (NL406_000535) | 9832..10026 | - | 195 | WP_046082581 | hypothetical protein | - |
| NL406_RS00540 (NL406_000540) | 10038..10520 | - | 483 | WP_047051477 | GNAT family protein | - |
| NL406_RS00545 (NL406_000545) | 10533..11087 | - | 555 | WP_000616063 | phospholipase D family protein | - |
| NL406_RS00550 (NL406_000550) | 11050..12081 | - | 1032 | WP_000138004 | P-type DNA transfer ATPase VirB11 | virB11 |
| NL406_RS00555 (NL406_000555) | 12074..13228 | - | 1155 | WP_001224296 | type IV secretion system protein VirB10 | virB10 |
| NL406_RS00560 (NL406_000560) | 13225..14112 | - | 888 | WP_000744355 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| NL406_RS00565 (NL406_000565) | 14115..14831 | - | 717 | WP_000914645 | type IV secretion system protein | virB8 |
| NL406_RS00570 (NL406_000570) | 14834..15004 | - | 171 | WP_021536809 | hypothetical protein | - |
| NL406_RS00575 (NL406_000575) | 15099..16106 | - | 1008 | WP_170879277 | type IV secretion system protein | virB6 |
| NL406_RS00580 (NL406_000580) | 16161..16397 | - | 237 | WP_000733633 | EexN family lipoprotein | - |
| NL406_RS00585 (NL406_000585) | 16401..17108 | - | 708 | WP_023187073 | type IV secretion system protein | virB5 |
| NL406_RS00590 (NL406_000590) | 17118..19391 | - | 2274 | WP_224132005 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| NL406_RS00595 (NL406_000595) | 19748..20062 | - | 315 | WP_001053888 | VirB3 family type IV secretion system protein | virB3 |
| NL406_RS00600 (NL406_000600) | 20114..20404 | - | 291 | WP_023223518 | TrbC/VirB2 family protein | virB2 |
| NL406_RS00605 (NL406_000605) | 20388..20705 | - | 318 | WP_001267114 | hypothetical protein | - |
| NL406_RS00610 (NL406_000610) | 20728..21468 | - | 741 | WP_042041934 | lytic transglycosylase domain-containing protein | virB1 |
| NL406_RS00615 (NL406_000615) | 21531..21767 | + | 237 | WP_021536804 | H-NS histone family protein | - |
| NL406_RS00620 (NL406_000620) | 21779..22216 | + | 438 | WP_023187074 | hypothetical protein | - |
| NL406_RS00625 (NL406_000625) | 22221..22538 | + | 318 | WP_023223517 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NL406_RS00630 (NL406_000630) | 22541..22855 | + | 315 | WP_023223516 | hypothetical protein | tfc15 |
| NL406_RS00635 (NL406_000635) | 22831..23556 | + | 726 | WP_224132007 | restriction endonuclease | - |
| NL406_RS00640 (NL406_000640) | 23722..23958 | + | 237 | WP_042041953 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| NL406_RS00645 (NL406_000645) | 23984..24421 | - | 438 | WP_255055251 | hypothetical protein | - |
| NL406_RS00650 (NL406_000650) | 24430..24756 | - | 327 | WP_016240388 | endoribonuclease MazF | - |
| NL406_RS00655 (NL406_000655) | 24746..25003 | - | 258 | WP_046082576 | hypothetical protein | - |
| NL406_RS00660 (NL406_000660) | 25015..25260 | - | 246 | WP_021536799 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NL406_RS00665 (NL406_000665) | 25712..26296 | + | 585 | WP_021536796 | recombinase family protein | - |
| NL406_RS00670 (NL406_000670) | 26329..27213 | + | 885 | WP_023187082 | replication protein RepA | - |