T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31366..71085
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL414_RS00190 (NL414_000190) | 29082..31373 | - | 2292 | WP_001289278 | F-type conjugative transfer protein TrbC | - |
| NL414_RS00195 (NL414_000195) | 31366..32436 | - | 1071 | WP_031942445 | IncI1-type conjugal transfer protein TrbB | trbB |
| NL414_RS00200 (NL414_000200) | 32455..33663 | - | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| NL414_RS00205 (NL414_000205) | 33969..34748 | - | 780 | WP_276527221 | protein FinQ | - |
| NL414_RS00210 (NL414_000210) | 35375..35527 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| NL414_RS00215 (NL414_000215) | 35599..35850 | - | 252 | WP_001291964 | hypothetical protein | - |
| NL414_RS00220 (NL414_000220) | 36351..36446 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NL414_RS00225 (NL414_000225) | 36511..36687 | - | 177 | WP_001054897 | hypothetical protein | - |
| NL414_RS00230 (NL414_000230) | 37079..37288 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NL414_RS00235 (NL414_000235) | 37360..38022 | - | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL414_RS00240 (NL414_000240) | 38093..40261 | - | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| NL414_RS00245 (NL414_000245) | 40358..40942 | - | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| NL414_RS00250 (NL414_000250) | 40971..42173 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| NL414_RS00255 (NL414_000255) | 42140..42754 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| NL414_RS00260 (NL414_000260) | 42754..45798 | - | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| NL414_RS00265 (NL414_000265) | 45888..46688 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NL414_RS00270 (NL414_000270) | 46672..46860 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NL414_RS00275 (NL414_000275) | 46924..47328 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| NL414_RS00280 (NL414_000280) | 47379..47906 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NL414_RS00285 (NL414_000285) | 47906..48610 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| NL414_RS00290 (NL414_000290) | 48610..49899 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| NL414_RS00295 (NL414_000295) | 49902..50885 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| NL414_RS00300 (NL414_000300) | 50896..51588 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NL414_RS00305 (NL414_000305) | 51585..51932 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NL414_RS00310 (NL414_000310) | 51950..55717 | - | 3768 | WP_023518849 | LPD7 domain-containing protein | - |
| NL414_RS00315 (NL414_000315) | 55807..56358 | - | 552 | WP_000014586 | phospholipase D family protein | - |
| NL414_RS00320 (NL414_000320) | 56373..56663 | - | 291 | WP_001314267 | hypothetical protein | traK |
| NL414_RS00325 (NL414_000325) | 56660..57808 | - | 1149 | WP_001024971 | plasmid transfer ATPase TraJ | virB11 |
| NL414_RS00330 (NL414_000330) | 57805..58623 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NL414_RS00335 (NL414_000335) | 58620..59078 | - | 459 | WP_001079807 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL414_RS00340 (NL414_000340) | 59473..60057 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NL414_RS00345 (NL414_000345) | 60117..61319 | - | 1203 | WP_000976357 | conjugal transfer protein TraF | - |
| NL414_RS00350 (NL414_000350) | 61405..62229 | - | 825 | WP_197314785 | conjugal transfer protein TraE | traE |
| NL414_RS00355 (NL414_000355) | 62380..63534 | - | 1155 | WP_001139956 | site-specific integrase | - |
| NL414_RS26155 | 64947..65171 | + | 225 | Protein_72 | hypothetical protein | - |
| NL414_RS00360 (NL414_000360) | 65168..66604 | - | 1437 | WP_000527428 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NL414_RS00365 (NL414_000365) | 66592..67248 | - | 657 | WP_001193549 | A24 family peptidase | - |
| NL414_RS00370 (NL414_000370) | 67233..67793 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NL414_RS00375 (NL414_000375) | 67803..68417 | - | 615 | WP_000908227 | type 4 pilus major pilin | - |
| NL414_RS00380 (NL414_000380) | 68434..69519 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| NL414_RS00385 (NL414_000385) | 69532..71085 | - | 1554 | WP_257843958 | ATPase, T2SS/T4P/T4SS family | virB11 |
| NL414_RS00390 (NL414_000390) | 71096..71548 | - | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| NL414_RS00395 (NL414_000395) | 71535..72830 | - | 1296 | WP_023518855 | type 4b pilus protein PilO2 | - |
| NL414_RS00400 (NL414_000400) | 72823..74505 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NL414_RS00405 (NL414_000405) | 74519..74956 | - | 438 | WP_000539806 | type IV pilus biogenesis protein PilM | - |
| NL414_RS00410 (NL414_000410) | 74956..76023 | - | 1068 | WP_197314788 | type IV pilus biogenesis lipoprotein PilL | - |