T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 35770..76020
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX000_RS25790 (NX000_25720) | 33486..35777 | - | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |
| NX000_RS25795 (NX000_25725) | 35770..36840 | - | 1071 | WP_065523389 | IncI1-type conjugal transfer protein TrbB | trbB |
| NX000_RS25800 (NX000_25730) | 36859..38067 | - | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| NX000_RS25805 (NX000_25735) | 38285..39271 | - | 987 | WP_001257838 | hypothetical protein | - |
| NX000_RS25810 (NX000_25740) | 39492..40720 | + | 1229 | WP_102384962 | IS3 family transposase | - |
| NX000_RS25815 (NX000_25745) | 40880..41032 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| NX000_RS25820 (NX000_25750) | 41104..41355 | - | 252 | WP_001291964 | hypothetical protein | - |
| NX000_RS25825 | 41854..41949 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| NX000_RS25830 (NX000_25760) | 42014..42190 | - | 177 | WP_001054900 | hypothetical protein | - |
| NX000_RS25835 (NX000_25765) | 42522..42731 | + | 210 | WP_000062602 | HEAT repeat domain-containing protein | - |
| NX000_RS25840 (NX000_25770) | 42803..43465 | - | 663 | WP_000644792 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NX000_RS25845 (NX000_25775) | 43530..45698 | - | 2169 | WP_000698366 | DotA/TraY family protein | traY |
| NX000_RS25850 (NX000_25780) | 45795..46379 | - | 585 | WP_001037996 | IncI1-type conjugal transfer protein TraX | - |
| NX000_RS25855 (NX000_25785) | 46408..47610 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| NX000_RS25860 (NX000_25790) | 47577..48191 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| NX000_RS25865 (NX000_25795) | 48191..51235 | - | 3045 | WP_001024776 | IncI1-type conjugal transfer protein TraU | traU |
| NX000_RS25870 (NX000_25800) | 51325..52125 | - | 801 | WP_001164792 | IncI1-type conjugal transfer protein TraT | traT |
| NX000_RS25875 (NX000_25805) | 52109..52297 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NX000_RS25880 (NX000_25810) | 52361..52765 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| NX000_RS25885 (NX000_25815) | 52816..53343 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NX000_RS25890 (NX000_25820) | 53343..54047 | - | 705 | WP_023155244 | IncI1-type conjugal transfer protein TraP | traP |
| NX000_RS25895 (NX000_25825) | 54047..55336 | - | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| NX000_RS25900 (NX000_25830) | 55339..56322 | - | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| NX000_RS25905 (NX000_25835) | 56333..57025 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NX000_RS25910 (NX000_25840) | 57022..57369 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NX000_RS25915 (NX000_25845) | 57387..61154 | - | 3768 | WP_006855639 | LPD7 domain-containing protein | - |
| NX000_RS25920 (NX000_25850) | 61244..61795 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| NX000_RS25925 (NX000_25855) | 61810..62100 | - | 291 | WP_001299214 | hypothetical protein | traK |
| NX000_RS25930 (NX000_25860) | 62097..63245 | - | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| NX000_RS25935 (NX000_25865) | 63242..64060 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NX000_RS25940 (NX000_25870) | 64057..64515 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NX000_RS25945 (NX000_25875) | 64910..65494 | - | 585 | WP_000977520 | histidine phosphatase family protein | - |
| NX000_RS25950 (NX000_25880) | 65554..66756 | - | 1203 | WP_000976357 | conjugal transfer protein TraF | - |
| NX000_RS25955 (NX000_25885) | 66842..67666 | - | 825 | WP_015058912 | conjugal transfer protein TraE | traE |
| NX000_RS25960 (NX000_25890) | 67817..68971 | - | 1155 | WP_001139955 | site-specific integrase | - |
| NX000_RS25965 (NX000_25895) | 69990..70238 | + | 249 | WP_001349157 | hypothetical protein | - |
| NX000_RS25970 (NX000_25900) | 70235..71527 | - | 1293 | WP_039719938 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NX000_RS25975 (NX000_25905) | 71527..72183 | - | 657 | WP_001193551 | A24 family peptidase | - |
| NX000_RS25980 (NX000_25910) | 72168..72728 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NX000_RS25985 (NX000_25915) | 72738..73352 | - | 615 | WP_000908228 | type 4 pilus major pilin | - |
| NX000_RS25990 (NX000_25920) | 73369..74454 | - | 1086 | WP_001208803 | type II secretion system F family protein | - |
| NX000_RS25995 (NX000_25925) | 74467..76020 | - | 1554 | WP_000362204 | ATPase, T2SS/T4P/T4SS family | virB11 |
| NX000_RS26000 (NX000_25930) | 76031..76483 | - | 453 | WP_001247333 | type IV pilus biogenesis protein PilP | - |
| NX000_RS26005 (NX000_25935) | 76470..77765 | - | 1296 | WP_021513967 | type 4b pilus protein PilO2 | - |
| NX000_RS26010 (NX000_25940) | 77758..79440 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NX000_RS26015 (NX000_25945) | 79454..79891 | - | 438 | WP_000539811 | type IV pilus biogenesis protein PilM | - |
| NX000_RS26020 (NX000_25950) | 79891..80958 | - | 1068 | WP_021513968 | type IV pilus biogenesis lipoprotein PilL | - |