T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51330..79849
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TC1_RS00305 (TC1_0062) | 46510..47160 | + | 651 | WP_000993956 | IS66-like element accessory protein TnpA | - |
| TC1_RS00310 (TC1_0063) | 47160..47507 | + | 348 | WP_000624618 | IS66 family insertion sequence element accessory protein TnpB | - |
| TC1_RS00315 (TC1_0064) | 47527..49098 | + | 1572 | WP_000381443 | IS66 family transposase | - |
| TC1_RS00320 | 49208..49504 | - | 297 | Protein_65 | hypothetical protein | - |
| TC1_RS00325 (TC1_0066) | 49805..50101 | + | 297 | WP_001272251 | hypothetical protein | - |
| TC1_RS00330 (TC1_0067) | 50212..51033 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| TC1_RS00335 (TC1_0068) | 51330..51932 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| TC1_RS00340 (TC1_0069) | 52255..52638 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| TC1_RS00345 (TC1_0070) | 52832..53503 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| TC1_RS00350 (TC1_0071) | 53640..53867 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| TC1_RS00355 (TC1_0072) | 53900..54259 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| TC1_RS00360 (TC1_0073) | 54274..54585 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| TC1_RS00365 (TC1_0074) | 54607..55173 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| TC1_RS00370 (TC1_0075) | 55160..55888 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| TC1_RS00375 (TC1_0076) | 55888..57339 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| TC1_RS00380 (TC1_0077) | 57329..57895 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| TC1_RS00385 (TC1_0078) | 57882..58202 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| TC1_RS00390 (TC1_0079) | 58199..58714 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| TC1_RS00395 (TC1_0080) | 58849..59070 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| TC1_RS00400 (TC1_0081) | 59063..59476 | + | 414 | WP_000549589 | hypothetical protein | - |
| TC1_RS00405 | 59469..59942 | + | 474 | WP_000549568 | hypothetical protein | - |
| TC1_RS00410 | 60022..60240 | + | 219 | WP_000556745 | hypothetical protein | - |
| TC1_RS00415 (TC1_0083) | 60268..60615 | + | 348 | WP_000836682 | hypothetical protein | - |
| TC1_RS00420 (TC1_0084) | 60741..63371 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| TC1_RS00425 (TC1_0085) | 63368..63754 | + | 387 | WP_015056478 | type-F conjugative transfer system protein TrbI | - |
| TC1_RS00430 (TC1_0086) | 63751..64383 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| TC1_RS00435 (TC1_0087) | 64380..65372 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| TC1_RS00440 (TC1_0088) | 65402..65707 | + | 306 | WP_000224416 | hypothetical protein | - |
| TC1_RS00445 (TC1_0089) | 65716..66354 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| TC1_RS00450 (TC1_0090) | 66351..68201 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| TC1_RS00455 | 68228..68485 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| TC1_RS00460 (TC1_0091) | 68478..69221 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| TC1_RS00465 (TC1_0092) | 69235..69579 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| TC1_RS00470 (TC1_0093) | 69698..69982 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| TC1_RS00475 (TC1_0094) | 69969..70514 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| TC1_RS00480 (TC1_0095) | 70444..70791 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| TC1_RS00485 (TC1_0096) | 70772..71164 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| TC1_RS00490 (TC1_0097) | 71151..72524 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| TC1_RS00495 (TC1_0098) | 72521..75343 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| TC1_RS00500 (TC1_0099) | 75359..75844 | + | 486 | WP_000605870 | hypothetical protein | - |
| TC1_RS00505 (TC1_0100) | 75893..76624 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| TC1_RS00510 (TC1_0101) | 76827..77564 | + | 738 | WP_000199905 | hypothetical protein | - |
| TC1_RS00515 (TC1_0102) | 77615..79849 | + | 2235 | WP_000009330 | type IV conjugative transfer system coupling protein TraD | virb4 |