T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 14182..37012
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAS24_RS00050 (TC1531_001) | 9404..10528 | - | 1125 | WP_000486716 | site-specific integrase | - |
| PAS24_RS00055 (TC1531_082) | 11130..11459 | - | 330 | WP_269822028 | pilus assembly protein | - |
| PAS24_RS00380 | 11435..11656 | + | 222 | Protein_11 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| PAS24_RS00060 | 12092..12247 | + | 156 | WP_001358489 | hypothetical protein | - |
| PAS24_RS00065 (TC1531_079) | 12244..13530 | - | 1287 | WP_052993113 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| PAS24_RS00070 (TC1531_078) | 13543..14178 | - | 636 | WP_106699807 | A24 family peptidase | - |
| PAS24_RS00075 (TC1531_077) | 14182..14664 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| PAS24_RS00080 (TC1531_076) | 14730..15293 | - | 564 | WP_034169414 | type 4 pilus major pilin | - |
| PAS24_RS00085 (TC1531_075) | 15343..16452 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| PAS24_RS00090 (TC1531_074) | 16443..17981 | - | 1539 | WP_000466225 | ATPase, T2SS/T4P/T4SS family | virB11 |
| PAS24_RS00095 (TC1531_073) | 18006..18500 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| PAS24_RS00100 (TC1531_072) | 18484..19806 | - | 1323 | WP_000454142 | type 4b pilus protein PilO2 | - |
| PAS24_RS00105 (TC1531_071) | 19845..21488 | - | 1644 | WP_001035592 | PilN family type IVB pilus formation outer membrane protein | - |
| PAS24_RS00110 (TC1531_070) | 21481..22017 | - | 537 | WP_001220543 | sigma 54-interacting transcriptional regulator | virb4 |
| PAS24_RS00115 (TC1531_069) | 22064..24022 | - | 1959 | WP_015059539 | type IV secretory system conjugative DNA transfer family protein | - |
| PAS24_RS00120 (TC1531_068) | 24038..25093 | - | 1056 | WP_001542006 | P-type DNA transfer ATPase VirB11 | virB11 |
| PAS24_RS00125 (TC1531_067) | 25112..26251 | - | 1140 | WP_034169415 | TrbI/VirB10 family protein | virB10 |
| PAS24_RS00130 (TC1531_066) | 26241..26942 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PAS24_RS00135 (TC1531_065) | 27008..27742 | - | 735 | WP_000432282 | type IV secretion system protein | virB8 |
| PAS24_RS00140 (TC1531_063) | 27908..30265 | - | 2358 | WP_000548950 | VirB4 family type IV secretion system protein | virb4 |
| PAS24_RS00145 (TC1531_062) | 30271..30591 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| PAS24_RS00150 (TC1531_061) | 30662..30952 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| PAS24_RS00155 (TC1531_060) | 30952..31536 | - | 585 | WP_001177117 | lytic transglycosylase domain-containing protein | virB1 |
| PAS24_RS00160 (TC1531_059) | 31557..31955 | - | 399 | WP_001153669 | hypothetical protein | - |
| PAS24_RS00165 (TC1531_058) | 32074..32511 | - | 438 | WP_034169416 | type IV pilus biogenesis protein PilM | - |
| PAS24_RS00170 (TC1531_057) | 32517..33752 | - | 1236 | WP_034169417 | toxin co-regulated pilus biosynthesis Q family protein | - |
| PAS24_RS00175 (TC1531_055) | 33755..34054 | - | 300 | WP_000835763 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PAS24_RS00180 (TC1531_056) | 34102..34911 | + | 810 | WP_024237698 | DUF5710 domain-containing protein | - |
| PAS24_RS00185 (TC1531_054) | 35134..35358 | - | 225 | WP_000713562 | EexN family lipoprotein | - |
| PAS24_RS00190 (TC1531_053) | 35367..36011 | - | 645 | WP_001310442 | type IV secretion system protein | - |
| PAS24_RS00195 (TC1531_052) | 36017..37012 | - | 996 | WP_001028540 | type IV secretion system protein | virB6 |
| PAS24_RS00200 (TC1531_051) | 37016..37273 | - | 258 | WP_000739144 | hypothetical protein | - |
| PAS24_RS00205 (TC1531_050) | 37270..37623 | - | 354 | WP_223286767 | hypothetical protein | - |
| PAS24_RS00210 (TC1531_048) | 37843..38289 | - | 447 | WP_001243165 | hypothetical protein | - |
| PAS24_RS00215 (TC1531_047) | 38300..38470 | - | 171 | WP_000550720 | hypothetical protein | - |
| PAS24_RS00220 (TC1531_046) | 38474..38917 | - | 444 | WP_000964330 | NfeD family protein | - |
| PAS24_RS00225 (TC1531_045) | 39291..40244 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| PAS24_RS00230 (TC1531_044) | 40271..40447 | - | 177 | WP_000753050 | hypothetical protein | - |
| PAS24_RS00235 | 40440..40655 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| PAS24_RS00240 (TC1531_042) | 40648..41154 | - | 507 | WP_001326595 | CaiF/GrlA family transcriptional regulator | - |