T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46751..55841
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3D63_RS00345 (NDM1Dok01_N0072) | 42782..43015 | - | 234 | WP_001191890 | hypothetical protein | - |
| P3D63_RS00350 (NDM1Dok01_N0073) | 42997..43614 | - | 618 | WP_001249395 | hypothetical protein | - |
| P3D63_RS00355 (NDM1Dok01_N0074) | 43782..46754 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| P3D63_RS00360 (NDM1Dok01_N0075) | 46751..48616 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| P3D63_RS00365 (NDM1Dok01_N0076) | 48627..49211 | + | 585 | WP_000332868 | hypothetical protein | - |
| P3D63_RS00370 (NDM1Dok01_N0077) | 49168..49797 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| P3D63_RS00375 (NDM1Dok01_N0078) | 49807..50253 | + | 447 | WP_000122507 | hypothetical protein | - |
| P3D63_RS00380 (NDM1Dok01_N0079) | 50263..50640 | + | 378 | WP_000869297 | hypothetical protein | - |
| P3D63_RS00385 (NDM1Dok01_N0080) | 50640..51302 | + | 663 | WP_001231464 | hypothetical protein | - |
| P3D63_RS00390 (NDM1Dok01_N0081) | 51483..51626 | + | 144 | WP_001275801 | hypothetical protein | - |
| P3D63_RS00395 (NDM1Dok01_N0082) | 51638..52003 | + | 366 | WP_001052530 | hypothetical protein | - |
| P3D63_RS00400 (NDM1Dok01_N0083) | 52148..52429 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| P3D63_RS00405 (NDM1Dok01_N0084) | 52426..53052 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| P3D63_RS00410 (NDM1Dok01_N0085) | 53036..53953 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| P3D63_RS00415 (NDM1Dok01_N0086) | 53953..55266 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| P3D63_RS00420 (NDM1Dok01_N0087) | 55263..55841 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| P3D63_RS00425 (NDM1Dok01_N0088) | 55845..56237 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| P3D63_RS00430 (NDM1Dok01_N0089) | 56522..57694 | + | 1173 | Protein_86 | IS1380-like element ISEcp1 family transposase | - |
| P3D63_RS00435 (NDM1Dok01_N0090) | 57800..58987 | + | 1188 | WP_080399009 | IS4 family transposase | - |
| P3D63_RS00440 (NDM1Dok01_N0091) | 59442..60587 | + | 1146 | WP_015056382 | class C beta-lactamase CMY-4 | - |