T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 59240..82168
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ190_RS26445 (AI2899V1_5053) | 59240..61429 | - | 2190 | WP_040110343 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LQ190_RS26450 (AI2899V1_5054) | 61681..62412 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| LQ190_RS26455 (AI2899V1_5055) | 62426..62935 | - | 510 | WP_000628100 | conjugal transfer entry exclusion protein TraS | - |
| LQ190_RS26460 (AI2899V1_5056) | 62932..65757 | - | 2826 | WP_001553826 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LQ190_RS26465 | 65754..67127 | - | 1374 | WP_021518370 | conjugal transfer pilus assembly protein TraH | traH |
| LQ190_RS26470 (AI2899V1_5057) | 67114..67506 | - | 393 | WP_000164675 | F-type conjugal transfer protein TrbF | - |
| LQ190_RS26475 (AI2899V1_5058) | 67460..67774 | - | 315 | WP_023149603 | P-type conjugative transfer protein TrbJ | - |
| LQ190_RS26480 (AI2899V1_5059) | 67764..68318 | - | 555 | WP_001553830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LQ190_RS26485 (AI2899V1_5060) | 68305..68589 | - | 285 | WP_000624105 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQ190_RS26490 (AI2899V1_5061) | 68670..69005 | + | 336 | WP_000415571 | hypothetical protein | - |
| LQ190_RS26495 (AI2899V1_5062) | 68986..69327 | - | 342 | WP_000556794 | conjugal transfer protein TrbA | - |
| LQ190_RS26500 (AI2899V1_5063) | 69341..70084 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LQ190_RS26505 (AI2899V1_5064) | 70077..70334 | - | 258 | WP_000864312 | conjugal transfer protein TrbE | - |
| LQ190_RS26510 (AI2899V1_5065) | 70361..72169 | - | 1809 | WP_000821840 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LQ190_RS26515 (AI2899V1_5066) | 72166..72804 | - | 639 | WP_021518374 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LQ190_RS26520 (AI2899V1_5067) | 72813..73805 | - | 993 | WP_000830180 | conjugal transfer pilus assembly protein TraU | traU |
| LQ190_RS26525 (AI2899V1_5068) | 73802..74434 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| LQ190_RS26530 (AI2899V1_5069) | 74431..74817 | - | 387 | WP_000099686 | type-F conjugative transfer system protein TrbI | - |
| LQ190_RS26535 (AI2899V1_5070) | 74814..77441 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| LQ190_RS26540 (AI2899V1_5072) | 77601..77822 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| LQ190_RS26545 (AI2899V1_5073) | 77957..78472 | - | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| LQ190_RS26550 (AI2899V1_5074) | 78469..78720 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| LQ190_RS26555 (AI2899V1_5075) | 78732..78929 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LQ190_RS26560 (AI2899V1_5076) | 78916..79506 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| LQ190_RS26565 (AI2899V1_5077) | 79496..80923 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LQ190_RS26570 (AI2899V1_5078) | 80923..81651 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LQ190_RS26575 (AI2899V1_5079) | 81638..82168 | - | 531 | WP_001324649 | type IV conjugative transfer system protein TraE | traE |
| LQ190_RS26580 (AI2899V1_REPA000000236) | 82233..82919 | + | 687 | Protein_96 | IS1 family transposase | - |
| LQ190_RS26585 (AI2899V1_5082) | 83173..84195 | - | 1023 | WP_000361402 | helicase UvrD | - |
| LQ190_RS26590 (AI2899V1_5083) | 84180..85745 | - | 1566 | WP_001128474 | AAA family ATPase | - |
| LQ190_RS26595 (AI2899V1_5084) | 85820..86236 | - | 417 | WP_001034044 | type II toxin-antitoxin system VapC family toxin | - |
| LQ190_RS26600 (AI2899V1_5085) | 86233..86463 | - | 231 | WP_001261286 | type II toxin-antitoxin system VapB family antitoxin | - |