T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52874..76944
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV33_RS27465 (AI3008V1_5168) | 47976..50289 | - | 2314 | Protein_49 | type IV conjugative transfer system coupling protein TraD | - |
| LQV33_RS27470 (AI3008V1_5170) | 50418..51107 | - | 690 | WP_015065540 | hypothetical protein | - |
| LQV33_RS27475 (AI3008V1_5171) | 51299..52030 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| LQV33_RS27480 (AI3008V1_5172) | 52339..52863 | - | 525 | WP_015065538 | hypothetical protein | - |
| LQV33_RS27485 (AI3008V1_5173) | 52874..55717 | - | 2844 | WP_015065537 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LQV33_RS27490 (AI3008V1_5174) | 55717..57087 | - | 1371 | WP_142499963 | conjugal transfer pilus assembly protein TraH | traH |
| LQV33_RS27495 (AI3008V1_5175) | 57074..57502 | - | 429 | WP_015065560 | hypothetical protein | - |
| LQV33_RS27500 (AI3008V1_5176) | 57495..58067 | - | 573 | WP_023292147 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LQV33_RS27505 (AI3008V1_5177) | 58039..58278 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQV33_RS27510 (AI3008V1_5178) | 58289..59041 | - | 753 | WP_020803149 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LQV33_RS27515 (AI3008V1_5179) | 59062..59388 | - | 327 | WP_004144402 | hypothetical protein | - |
| LQV33_RS27520 (AI3008V1_5180) | 59401..59649 | - | 249 | WP_004152675 | hypothetical protein | - |
| LQV33_RS27525 (AI3008V1_5181) | 59627..59881 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LQV33_RS27530 (AI3008V1_5182) | 59913..61868 | - | 1956 | WP_229998267 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LQV33_RS27535 (AI3008V1_5183) | 61927..62565 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LQV33_RS27540 (AI3008V1_5184) | 62578..63567 | - | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| LQV33_RS27545 (AI3008V1_5185) | 63564..63953 | - | 390 | WP_015065532 | hypothetical protein | - |
| LQV33_RS27550 (AI3008V1_5186) | 63995..64621 | - | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| LQV33_RS27555 (AI3008V1_5187) | 64621..65010 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| LQV33_RS27560 (AI3008V1_5188) | 65010..67649 | - | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| LQV33_RS27565 (AI3008V1_5189) | 67721..68119 | - | 399 | WP_011977783 | hypothetical protein | - |
| LQV33_RS27570 | 68127..68369 | - | 243 | WP_004158946 | hypothetical protein | - |
| LQV33_RS27575 (AI3008V1_5190) | 68561..68965 | - | 405 | WP_004152503 | hypothetical protein | - |
| LQV33_RS27580 (AI3008V1_5191) | 69032..69343 | - | 312 | WP_004152502 | hypothetical protein | - |
| LQV33_RS27585 (AI3008V1_5192) | 69344..69562 | - | 219 | WP_004152501 | hypothetical protein | - |
| LQV33_RS27590 (AI3008V1_5193) | 69668..70078 | - | 411 | WP_032329942 | hypothetical protein | - |
| LQV33_RS27595 (AI3008V1_5194) | 70210..70794 | - | 585 | WP_015065529 | type IV conjugative transfer system lipoprotein TraV | traV |
| LQV33_RS27600 (AI3008V1_5195) | 70908..72332 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LQV33_RS27605 (AI3008V1_5196) | 72332..73072 | - | 741 | WP_015065528 | type-F conjugative transfer system secretin TraK | traK |
| LQV33_RS27610 (AI3008V1_5197) | 73059..73625 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LQV33_RS27615 (AI3008V1_5198) | 73645..73950 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LQV33_RS27620 (AI3008V1_5199) | 73964..74332 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LQV33_RS27625 | 74397..74600 | - | 204 | WP_171486139 | TraY domain-containing protein | - |
| LQV33_RS27630 (AI3008V1_5200) | 74733..75452 | - | 720 | WP_015065526 | hypothetical protein | - |
| LQV33_RS27635 (AI3008V1_5201) | 75652..76068 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQV33_RS27640 (AI3008V1_5202) | 76459..76944 | + | 486 | WP_015065525 | transglycosylase SLT domain-containing protein | virB1 |
| LQV33_RS27645 | 76977..77306 | - | 330 | WP_015065524 | DUF5983 family protein | - |
| LQV33_RS27650 (AI3008V1_5203) | 77339..78161 | - | 823 | Protein_86 | DUF932 domain-containing protein | - |
| LQV33_RS27655 (AI3008V1_5204) | 78985..79548 | - | 564 | WP_004152756 | methyltransferase | - |
| LQV33_RS27660 (AI3008V1_5205) | 79596..80951 | - | 1356 | WP_015065512 | DUF3560 domain-containing protein | - |
| LQV33_RS27665 (AI3008V1_5206) | 81003..81233 | - | 231 | WP_009310031 | hypothetical protein | - |
| LQV33_RS27670 (AI3008V1_5207) | 81325..81552 | - | 228 | WP_001568050 | hypothetical protein | - |