T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26512..52320
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS350_RS00135 (pCS0010A_24) | 26512..28719 | - | 2208 | WP_000009364 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HS350_RS00140 (pCS0010A_25) | 28971..29702 | - | 732 | WP_001447147 | conjugal transfer complement resistance protein TraT | - |
| HS350_RS00145 (pCS0010A_26) | 29734..30237 | - | 504 | WP_000605510 | hypothetical protein | - |
| HS350_RS00150 (pCS0010A_27) | 30252..33074 | - | 2823 | WP_052970644 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HS350_RS00155 (pCS0010A_28) | 33071..34447 | - | 1377 | WP_000982833 | conjugal transfer pilus assembly protein TraH | traH |
| HS350_RS00160 | 34444..34806 | - | 363 | WP_071779407 | P-type conjugative transfer protein TrbJ | - |
| HS350_RS00165 (pCS0010A_29) | 34736..35281 | - | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS350_RS00170 (pCS0010A_30) | 35268..35552 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HS350_RS00175 (pCS0010A_31) | 35671..36018 | - | 348 | WP_001287676 | conjugal transfer protein TrbA | - |
| HS350_RS00180 (pCS0010A_32) | 36034..36777 | - | 744 | WP_001030389 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS350_RS00185 | 36770..37027 | - | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| HS350_RS00190 (pCS0010A_33) | 37054..38862 | - | 1809 | WP_000821846 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS350_RS00195 (pCS0010A_34) | 38859..39497 | - | 639 | WP_022630459 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS350_RS00200 (pCS0010A_35) | 39506..40498 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| HS350_RS00205 (pCS0010A_36) | 40495..41127 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| HS350_RS00210 | 41124..41510 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| HS350_RS00215 (pCS0010A_37) | 41507..44134 | - | 2628 | WP_001064251 | type IV secretion system protein TraC | virb4 |
| HS350_RS00220 | 44294..44515 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| HS350_RS00225 (pCS0010A_38) | 44650..45165 | - | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS350_RS00230 | 45162..45413 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| HS350_RS00235 | 45425..45622 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| HS350_RS00240 (pCS0010A_39) | 45609..46199 | - | 591 | WP_000002796 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS350_RS00245 (pCS0010A_40) | 46189..47616 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS350_RS00250 (pCS0010A_41) | 47616..48344 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HS350_RS00255 (pCS0010A_42) | 48331..48897 | - | 567 | WP_000399785 | type IV conjugative transfer system protein TraE | traE |
| HS350_RS00260 (pCS0010A_43) | 48919..49230 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HS350_RS00265 (pCS0010A_44) | 49245..49610 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| HS350_RS00270 (pCS0010A_45) | 49643..50038 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HS350_RS00275 (pCS0010A_46) | 50137..50826 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| HS350_RS00280 (pCS0010A_47) | 51013..51396 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS350_RS00285 (pCS0010A_48) | 51811..52320 | + | 510 | WP_000759163 | transglycosylase SLT domain-containing protein | virB1 |
| HS350_RS00290 (pCS0010A_49) | 52616..53437 | - | 822 | WP_001234468 | DUF932 domain-containing protein | - |
| HS350_RS00295 (pCS0010A_50) | 53556..53843 | - | 288 | WP_000107520 | hypothetical protein | - |
| HS350_RS00300 | 53868..53987 | - | 120 | WP_001127499 | hypothetical protein | - |
| HS350_RS00305 | 54144..54441 | + | 298 | Protein_60 | hypothetical protein | - |
| HS350_RS00310 | 54742..54864 | - | 123 | WP_223195199 | Hok/Gef family protein | - |
| HS350_RS00790 | 54809..54961 | - | 153 | Protein_62 | DUF5431 family protein | - |
| HS350_RS00315 (pCS0010A_51) | 55112..55898 | - | 787 | Protein_63 | plasmid SOS inhibition protein A | - |
| HS350_RS00320 (pCS0010A_52) | 55895..56329 | - | 435 | WP_000845922 | conjugation system SOS inhibitor PsiB | - |