T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..41209
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NVS94_RS02055 (NVS94_02055) | 1..1554 | + | 1554 | WP_001579763 | ATPase, T2SS/T4P/T4SS family | virB11 |
| NVS94_RS02060 (NVS94_02060) | 1567..2664 | + | 1098 | WP_001208805 | type II secretion system F family protein | - |
| NVS94_RS02065 (NVS94_02065) | 2682..3296 | + | 615 | WP_094819134 | type 4 pilus major pilin | - |
| NVS94_RS02070 (NVS94_02070) | 3306..3866 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| NVS94_RS02075 (NVS94_02075) | 3851..4507 | + | 657 | WP_001193553 | prepilin peptidase | - |
| NVS94_RS02080 (NVS94_02080) | 4507..5931 | + | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NVS94_RS02675 | 5928..6149 | - | 222 | Protein_6 | prepilin | - |
| NVS94_RS02680 | 8353..8574 | + | 222 | Protein_7 | prepilin | - |
| NVS94_RS02085 (NVS94_02085) | 8571..8993 | - | 423 | WP_162847923 | prepilin, shufflon protein A | - |
| NVS94_RS02090 (NVS94_02090) | 8977..10131 | + | 1155 | WP_001139958 | site-specific integrase | - |
| NVS94_RS02095 (NVS94_02095) | 10282..11106 | + | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| NVS94_RS02100 (NVS94_02100) | 11192..12394 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| NVS94_RS02105 (NVS94_02105) | 12454..13038 | + | 585 | WP_001579766 | histidine phosphatase family protein | - |
| NVS94_RS02110 (NVS94_02110) | 13433..13891 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NVS94_RS02115 (NVS94_02115) | 13888..14706 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NVS94_RS02120 (NVS94_02120) | 14703..15851 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NVS94_RS02125 (NVS94_02125) | 15848..16138 | + | 291 | WP_001372180 | hypothetical protein | traK |
| NVS94_RS02130 (NVS94_02130) | 16153..16704 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| NVS94_RS02135 (NVS94_02135) | 16794..20561 | + | 3768 | WP_001579768 | LPD7 domain-containing protein | - |
| NVS94_RS02140 (NVS94_02140) | 20579..20926 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NVS94_RS02145 (NVS94_02145) | 20923..21615 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NVS94_RS02150 (NVS94_02150) | 21626..22609 | + | 984 | WP_001579769 | IncI1-type conjugal transfer protein TraN | traN |
| NVS94_RS02155 (NVS94_02155) | 22612..23901 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| NVS94_RS02160 (NVS94_02160) | 23901..24605 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NVS94_RS02165 (NVS94_02165) | 24605..25132 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NVS94_RS02170 (NVS94_02170) | 25183..25587 | + | 405 | WP_001579770 | DUF6750 family protein | traR |
| NVS94_RS02175 (NVS94_02175) | 25651..25839 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NVS94_RS02180 (NVS94_02180) | 25823..26623 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NVS94_RS02185 (NVS94_02185) | 26713..29757 | + | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| NVS94_RS02190 (NVS94_02190) | 29757..30371 | + | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| NVS94_RS02195 (NVS94_02195) | 30338..31540 | + | 1203 | WP_001189159 | IncI1-type conjugal transfer protein TraW | traW |
| NVS94_RS02200 (NVS94_02200) | 31569..32153 | + | 585 | WP_001579774 | IncI1-type conjugal transfer protein TraX | - |
| NVS94_RS02205 (NVS94_02205) | 32250..34418 | + | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| NVS94_RS02210 (NVS94_02210) | 34494..35108 | + | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NVS94_RS02215 (NVS94_02215) | 35206..35415 | + | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| NVS94_RS02220 (NVS94_02220) | 35624..35800 | + | 177 | WP_001054900 | hypothetical protein | - |
| NVS94_RS02225 (NVS94_02225) | 36517..36681 | - | 165 | WP_001323923 | hypothetical protein | - |
| NVS94_RS02230 (NVS94_02230) | 36724..36975 | + | 252 | WP_001291968 | hypothetical protein | - |
| NVS94_RS02235 (NVS94_02235) | 37047..37199 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| NVS94_RS02240 (NVS94_02240) | 37826..38605 | + | 780 | WP_275450201 | protein FinQ | - |
| NVS94_RS02245 (NVS94_02245) | 38912..40120 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| NVS94_RS02250 (NVS94_02250) | 40139..41209 | + | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| NVS94_RS02255 (NVS94_02255) | 41202..43493 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |