T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12957..26426
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETEC_RS26165 (ETEC_p666_0160) | 12957..15245 | - | 2289 | WP_000009358 | type IV conjugative transfer system coupling protein TraD | prgC |
| ETEC_RS30280 (ETEC_p666_0170) | 15296..15823 | - | 528 | Protein_15 | hypothetical protein | - |
| ETEC_RS26175 (ETEC_p666_0180) | 15855..17426 | - | 1572 | WP_000381395 | IS66-like element ISCro1 family transposase | - |
| ETEC_RS26180 (ETEC_p666_0190) | 17446..17793 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| ETEC_RS26185 (ETEC_p666_0200) | 17793..18470 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| ETEC_RS26190 (ETEC_p666_0210) | 18711..19091 | + | 381 | WP_001171554 | transposase | - |
| ETEC_RS26195 (ETEC_p666_0220) | 19088..19435 | + | 348 | WP_000612591 | IS66 family insertion sequence element accessory protein TnpB | - |
| ETEC_RS26200 (ETEC_p666_0230) | 19485..21023 | + | 1539 | WP_000998068 | IS66 family transposase | - |
| ETEC_RS26205 (ETEC_p666_0240) | 21034..21393 | - | 360 | Protein_22 | hypothetical protein | - |
| ETEC_RS29340 (ETEC_p666_0250) | 21386..21607 | - | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| ETEC_RS26215 (ETEC_p666_0260) | 21742..22257 | - | 516 | WP_000809904 | type IV conjugative transfer system lipoprotein TraV | traV |
| ETEC_RS26220 (ETEC_p666_0270) | 22254..22505 | - | 252 | WP_001038347 | conjugal transfer protein TrbG | - |
| ETEC_RS26225 (ETEC_p666_0280) | 22498..22818 | - | 321 | WP_001057295 | conjugal transfer protein TrbD | virb4 |
| ETEC_RS26230 (ETEC_p666_0290) | 22805..23371 | - | 567 | WP_000896600 | conjugal transfer pilus-stabilizing protein TraP | - |
| ETEC_RS26235 (ETEC_p666_0300) | 23361..24812 | - | 1452 | WP_000146686 | F-type conjugal transfer pilus assembly protein TraB | traB |
| ETEC_RS26240 (ETEC_p666_0310) | 24812..25540 | - | 729 | WP_001230778 | type-F conjugative transfer system secretin TraK | traK |
| ETEC_RS26245 (ETEC_p666_0320) | 25527..26093 | - | 567 | WP_000399801 | type IV conjugative transfer system protein TraE | traE |
| ETEC_RS26250 (ETEC_p666_0330) | 26115..26426 | - | 312 | WP_000012116 | type IV conjugative transfer system protein TraL | traL |
| ETEC_RS26255 (ETEC_p666_0340) | 26441..26806 | - | 366 | WP_001098999 | type IV conjugative transfer system pilin TraA | - |
| ETEC_RS26260 (ETEC_p666_0350) | 26838..27233 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| ETEC_RS26265 (ETEC_p666_0360) | 27332..28021 | - | 690 | WP_000283391 | conjugal transfer transcriptional regulator TraJ | - |
| ETEC_RS26270 (ETEC_p666_0370) | 28208..28591 | - | 384 | WP_001151538 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| ETEC_RS26275 (ETEC_p666_0380) | 28913..29515 | + | 603 | WP_000243716 | transglycosylase SLT domain-containing protein | - |
| ETEC_RS26280 (ETEC_p666_0390) | 29812..30633 | - | 822 | WP_001234441 | DUF932 domain-containing protein | - |
| ETEC_RS26285 (ETEC_p666_0400) | 30744..31040 | - | 297 | WP_001272251 | hypothetical protein | - |