T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7373..30845
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SL1344_RS23655 | 6739..6966 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| SL1344_RS23660 | 6966..7364 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| SL1344_RS23665 (SL1344_P1_0007) | 7373..9535 | - | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SL1344_RS23670 (SL1344_P1_0008) | 9912..10643 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| SL1344_RS23675 (SL1344_P1_0009) | 10679..11173 | - | 495 | WP_010999946 | entry exclusion protein | - |
| SL1344_RS23680 (SL1344_P1_0010) | 11189..14011 | - | 2823 | WP_001007087 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SL1344_RS23685 (SL1344_P1_0011) | 14008..15390 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| SL1344_RS23690 (SL1344_P1_0012) | 15380..15928 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SL1344_RS23695 (SL1344_P1_0013) | 15915..16208 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SL1344_RS23700 (SL1344_P1_0014) | 16422..17171 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SL1344_RS23705 (SL1344_P1_0015) | 17183..17398 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| SL1344_RS23710 (SL1344_P1_0016) | 17409..19235 | - | 1827 | WP_000827529 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SL1344_RS23715 | 19232..19651 | - | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| SL1344_RS23720 (SL1344_P1_0017) | 19688..20326 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SL1344_RS23725 (SL1344_P1_0018) | 20311..20619 | - | 309 | WP_010999945 | hypothetical protein | - |
| SL1344_RS23730 (SL1344_P1_0019) | 20638..21630 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| SL1344_RS23735 (SL1344_P1_0020) | 21627..22259 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| SL1344_RS23740 (SL1344_P1_0021) | 22256..22642 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| SL1344_RS23745 (SL1344_P1_0022) | 22617..25265 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| SL1344_RS23750 | 25281..25544 | - | 264 | WP_001239255 | hypothetical protein | - |
| SL1344_RS23755 (SL1344_P1_0023) | 25661..26128 | - | 468 | WP_000549562 | hypothetical protein | - |
| SL1344_RS23760 (SL1344_P1_0024) | 26121..26342 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| SL1344_RS23765 (SL1344_P1_0025) | 26477..26992 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| SL1344_RS23770 (SL1344_P1_0026) | 26989..27234 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| SL1344_RS23775 (SL1344_P1_0027) | 27212..27808 | - | 597 | WP_000527897 | conjugal transfer pilus-stabilizing protein TraP | - |
| SL1344_RS23780 (SL1344_P1_0028) | 27798..29219 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SL1344_RS23785 (SL1344_P1_0029) | 29219..29959 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| SL1344_RS23790 (SL1344_P1_0030) | 29946..30512 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| SL1344_RS23795 (SL1344_P1_0031) | 30534..30845 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| SL1344_RS23800 (SL1344_P1_0032) | 30860..31222 | - | 363 | WP_001273051 | type IV conjugative transfer system pilin TraA | - |
| SL1344_RS26285 (SL1344_P1_0033) | 31264..31491 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| SL1344_RS23805 (SL1344_P1_0034) | 31585..32271 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| SL1344_RS23810 (SL1344_P1_0035) | 32464..32844 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SL1344_RS23815 (SL1344_P1_0036) | 33259..33729 | + | 471 | WP_014344446 | transglycosylase SLT domain-containing protein | - |
| SL1344_RS27530 | 34040..34858 | - | 819 | Protein_37 | DUF932 domain-containing protein | - |
| SL1344_RS27480 | 34961..35119 | - | 159 | WP_001704449 | hypothetical protein | - |
| SL1344_RS27885 | 35205..35333 | - | 129 | WP_000372429 | hypothetical protein | - |