T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 237276..246871
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HER27_RS33030 | 234051..234277 | - | 227 | Protein_223 | chaperonin GroEL | - |
| HER27_RS22875 (HER27_022875) | 234572..235492 | + | 921 | WP_004673402 | zincin-like metallopeptidase domain-containing protein | - |
| HER27_RS22880 (HER27_022880) | 236266..236637 | - | 372 | WP_042120136 | hypothetical protein | - |
| HER27_RS22885 (HER27_022885) | 236736..237272 | + | 537 | WP_011053366 | hypothetical protein | - |
| HER27_RS22890 (HER27_022890) | 237276..237944 | + | 669 | WP_064820013 | lytic transglycosylase domain-containing protein | virB1 |
| HER27_RS22895 (HER27_022895) | 237941..238240 | + | 300 | WP_007636189 | TrbC/VirB2 family protein | virB2 |
| HER27_RS22900 (HER27_022900) | 238246..238584 | + | 339 | WP_011053369 | type IV secretion system protein VirB3 | virB3 |
| HER27_RS22905 (HER27_022905) | 238577..240940 | + | 2364 | WP_167860844 | VirB4 family type IV secretion system protein | virb4 |
| HER27_RS22910 (HER27_022910) | 240937..241638 | + | 702 | WP_011053371 | P-type DNA transfer protein VirB5 | virB5 |
| HER27_RS22915 (HER27_022915) | 241635..241868 | + | 234 | WP_008537008 | EexN family lipoprotein | - |
| HER27_RS22920 (HER27_022920) | 241871..242803 | + | 933 | WP_064820015 | type IV secretion system protein | virB6 |
| HER27_RS33035 | 242845..243126 | + | 282 | WP_081278376 | hypothetical protein | - |
| HER27_RS22925 (HER27_022925) | 243128..243799 | + | 672 | WP_064820016 | virB8 family protein | virB8 |
| HER27_RS22930 (HER27_022930) | 243796..244653 | + | 858 | WP_064820017 | P-type conjugative transfer protein VirB9 | virB9 |
| HER27_RS22935 (HER27_022935) | 244662..245834 | + | 1173 | WP_064820018 | type IV secretion system protein VirB10 | virB10 |
| HER27_RS22940 (HER27_022940) | 245843..246871 | + | 1029 | WP_064820019 | P-type DNA transfer ATPase VirB11 | virB11 |
| HER27_RS22945 (HER27_022945) | 246915..247493 | - | 579 | WP_064820020 | PIN domain-containing protein | - |
| HER27_RS22950 (HER27_022950) | 247483..247929 | - | 447 | WP_225882822 | DNA-binding protein | - |
| HER27_RS22955 (HER27_022955) | 248443..249633 | - | 1191 | WP_064820021 | DUF1173 domain-containing protein | - |
| HER27_RS33040 | 249943..250200 | + | 258 | Protein_242 | toprim domain-containing protein | - |
| HER27_RS22965 (HER27_022965) | 250525..251465 | + | 941 | Protein_243 | DUF2493 domain-containing protein | - |
| HER27_RS22970 (HER27_022970) | 251550..251816 | + | 267 | WP_004676093 | hypothetical protein | - |