T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49377..58467
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UMNK88_RS28710 | 45408..45641 | - | 234 | WP_001191890 | hypothetical protein | - |
| UMNK88_RS28715 (pUMNK88_63) | 45623..46240 | - | 618 | WP_001249395 | hypothetical protein | - |
| UMNK88_RS29430 (pUMNK88_64) | 46408..49380 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| UMNK88_RS28725 (pUMNK88_65) | 49377..51242 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| UMNK88_RS28730 (pUMNK88_66) | 51292..51837 | + | 546 | WP_000228720 | hypothetical protein | - |
| UMNK88_RS28735 (pUMNK88_67) | 51794..52423 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| UMNK88_RS28740 (pUMNK88_68) | 52433..52879 | + | 447 | WP_000122507 | hypothetical protein | - |
| UMNK88_RS28745 (pUMNK88_69) | 52889..53266 | + | 378 | WP_000869297 | hypothetical protein | - |
| UMNK88_RS28750 (pUMNK88_70) | 53266..53928 | + | 663 | WP_001231464 | hypothetical protein | - |
| UMNK88_RS34545 | 54109..54252 | + | 144 | WP_001275801 | hypothetical protein | - |
| UMNK88_RS28755 (pUMNK88_71) | 54264..54629 | + | 366 | WP_001052530 | hypothetical protein | - |
| UMNK88_RS28760 (pUMNK88_72) | 54774..55055 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| UMNK88_RS28765 (pUMNK88_73) | 55052..55678 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| UMNK88_RS28770 (pUMNK88_74) | 55662..56579 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| UMNK88_RS28775 (pUMNK88_75) | 56579..57892 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| UMNK88_RS28780 (pUMNK88_76) | 57889..58467 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| UMNK88_RS28785 (pUMNK88_77) | 58471..58863 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| UMNK88_RS28790 (pUMNK88_78) | 59144..60399 | + | 1256 | Protein_85 | IS1380 family transposase | - |
| UMNK88_RS28800 (pUMNK88_79) | 60723..61868 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| UMNK88_RS28805 (pUMNK88_80) | 61962..62495 | + | 534 | WP_001221666 | lipocalin family protein | - |
| UMNK88_RS28810 (pUMNK88_81) | 62492..62809 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| UMNK88_RS35495 (pUMNK88_82) | 63066..63431 | + | 366 | Protein_89 | LuxR family transcriptional regulator | - |