T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5586..28631
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1R18_RS00005 (H1R18_00005) | 1166..2273 | - | 1108 | Protein_0 | IS3 family transposase | - |
| H1R18_RS00010 (H1R18_00010) | 2337..3764 | - | 1428 | Protein_1 | conjugal transfer mating pair stabilization protein TraN | - |
| H1R18_RS00015 (H1R18_00015) | 3915..4917 | - | 1003 | Protein_2 | TraU family protein | - |
| H1R18_RS00020 (H1R18_00020) | 4911..5354 | - | 444 | WP_244637333 | EAL domain-containing protein | - |
| H1R18_RS26570 | 5371..5589 | - | 219 | WP_244637334 | hypothetical protein | - |
| H1R18_RS00025 (H1R18_00025) | 5586..6854 | - | 1269 | WP_039272404 | TrbC family F-type conjugative pilus assembly protein | traW |
| H1R18_RS00030 (H1R18_00030) | 6817..7347 | - | 531 | WP_000672456 | S26 family signal peptidase | - |
| H1R18_RS00035 (H1R18_00035) | 7344..7661 | - | 318 | WP_000364398 | hypothetical protein | - |
| H1R18_RS00040 (H1R18_00040) | 7676..10123 | - | 2448 | WP_051479468 | type IV secretion system protein TraC | virb4 |
| H1R18_RS00045 (H1R18_00045) | 10120..10827 | - | 708 | WP_001259344 | DsbC family protein | - |
| H1R18_RS00050 (H1R18_00050) | 10976..13582 | - | 2607 | Protein_10 | hypothetical protein | - |
| H1R18_RS00055 (H1R18_00055) | 13670..14077 | + | 408 | WP_048242260 | transposase | - |
| H1R18_RS00060 (H1R18_00060) | 14074..14424 | + | 351 | WP_021567584 | IS66 family insertion sequence element accessory protein TnpB | - |
| H1R18_RS00065 (H1R18_00065) | 14455..16047 | + | 1593 | WP_044596437 | IS66 family transposase | - |
| H1R18_RS00070 (H1R18_00070) | 16067..18964 | - | 2898 | WP_244637335 | Ig-like domain-containing protein | - |
| H1R18_RS00075 (H1R18_00075) | 19165..19557 | - | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| H1R18_RS00080 (H1R18_00080) | 19561..20139 | - | 579 | WP_039272410 | type IV conjugative transfer system lipoprotein TraV | traV |
| H1R18_RS00085 (H1R18_00085) | 20136..21452 | - | 1317 | WP_039272412 | TraB/VirB10 family protein | traB |
| H1R18_RS00090 (H1R18_00090) | 21449..22366 | - | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| H1R18_RS00095 (H1R18_00095) | 22350..22976 | - | 627 | WP_039272415 | TraE/TraK family type IV conjugative transfer system protein | traE |
| H1R18_RS00100 (H1R18_00100) | 22973..23254 | - | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| H1R18_RS00105 (H1R18_00105) | 23397..23744 | - | 348 | WP_039272417 | hypothetical protein | - |
| H1R18_RS00110 (H1R18_00110) | 24079..24741 | - | 663 | WP_039272419 | hypothetical protein | - |
| H1R18_RS00115 (H1R18_00115) | 24741..25118 | - | 378 | WP_000869260 | hypothetical protein | - |
| H1R18_RS00120 (H1R18_00120) | 25128..25574 | - | 447 | WP_039272421 | hypothetical protein | - |
| H1R18_RS00125 (H1R18_00125) | 25585..26214 | - | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| H1R18_RS00130 (H1R18_00130) | 26171..26716 | - | 546 | WP_023356350 | hypothetical protein | - |
| H1R18_RS00135 (H1R18_00135) | 26766..28631 | - | 1866 | WP_000178858 | conjugative transfer system coupling protein TraD | virb4 |
| H1R18_RS00140 (H1R18_00140) | 28628..31591 | - | 2964 | WP_058662807 | MobH family relaxase | - |
| H1R18_RS00145 (H1R18_00145) | 31759..32376 | + | 618 | WP_012766323 | hypothetical protein | - |
| H1R18_RS00150 (H1R18_00150) | 32358..32591 | + | 234 | WP_039272424 | hypothetical protein | - |