T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 35817..59274
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP898_RS00185 | 31141..31794 | - | 654 | WP_170855322 | hypothetical protein | - |
| LP898_RS00190 | 31806..32930 | - | 1125 | WP_000486716 | site-specific integrase | - |
| LP898_RS00400 | 32981..33214 | + | 234 | Protein_39 | Shufflon protein A' | - |
| LP898_RS00195 | 33769..34029 | - | 261 | WP_029237379 | hypothetical protein | - |
| LP898_RS00200 | 34026..35165 | - | 1140 | Protein_41 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LP898_RS00205 | 35178..35813 | - | 636 | WP_000934977 | A24 family peptidase | - |
| LP898_RS00210 | 35817..36299 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| LP898_RS00215 | 36365..36922 | - | 558 | WP_229653913 | type 4 pilus major pilin | - |
| LP898_RS00220 | 36967..38076 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| LP898_RS00225 | 38067..39605 | - | 1539 | WP_000466225 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LP898_RS00230 | 39630..40124 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| LP898_RS00235 | 40108..41430 | - | 1323 | WP_000454142 | type 4b pilus protein PilO2 | - |
| LP898_RS00240 | 41469..43112 | - | 1644 | WP_001035592 | PilN family type IVB pilus formation outer membrane protein | - |
| LP898_RS00245 | 43105..43641 | - | 537 | WP_001220543 | sigma 54-interacting transcriptional regulator | virb4 |
| LP898_RS00250 | 43688..45646 | - | 1959 | WP_159198865 | type IV secretory system conjugative DNA transfer family protein | - |
| LP898_RS00255 | 45662..46717 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| LP898_RS00260 | 46736..47875 | - | 1140 | WP_000790640 | TrbI/VirB10 family protein | virB10 |
| LP898_RS00265 | 47865..48566 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LP898_RS00270 | 48632..49366 | - | 735 | WP_000432282 | type IV secretion system protein | virB8 |
| LP898_RS00275 | 49532..51889 | - | 2358 | WP_063078682 | VirB4 family type IV secretion system protein | virb4 |
| LP898_RS00280 | 51895..52215 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| LP898_RS00285 | 52286..52576 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| LP898_RS00290 | 52576..53160 | - | 585 | WP_001177113 | lytic transglycosylase domain-containing protein | virB1 |
| LP898_RS00295 | 53181..53579 | - | 399 | WP_001153665 | hypothetical protein | - |
| LP898_RS00300 | 53698..54135 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| LP898_RS00305 | 54141..55376 | - | 1236 | WP_015059538 | TcpQ domain-containing protein | - |
| LP898_RS00310 | 55379..55678 | - | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LP898_RS00315 | 55746..56027 | - | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LP898_RS00320 | 56017..56268 | - | 252 | WP_000121741 | hypothetical protein | - |
| LP898_RS00405 | 56368..57003 | - | 636 | WP_336245609 | hypothetical protein | - |
| LP898_RS00325 | 57076..57363 | - | 288 | WP_001032611 | EexN family lipoprotein | - |
| LP898_RS00330 | 57376..57630 | - | 255 | WP_001043555 | EexN family lipoprotein | - |
| LP898_RS00335 | 57632..58273 | - | 642 | WP_001425343 | type IV secretion system protein | - |
| LP898_RS00340 | 58279..59274 | - | 996 | WP_001028543 | type IV secretion system protein | virB6 |
| LP898_RS00345 | 59278..59535 | - | 258 | WP_000739144 | hypothetical protein | - |
| LP898_RS00350 | 59532..59885 | - | 354 | WP_223286767 | hypothetical protein | - |
| LP898_RS00355 | 60105..60551 | - | 447 | WP_001243165 | hypothetical protein | - |
| LP898_RS00360 | 60562..60732 | - | 171 | WP_000550720 | hypothetical protein | - |
| LP898_RS00365 | 60736..61179 | - | 444 | WP_000964330 | NfeD family protein | - |
| LP898_RS00370 | 61553..62506 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| LP898_RS00375 | 62533..62709 | - | 177 | WP_000753050 | hypothetical protein | - |
| LP898_RS00380 | 62702..62917 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| LP898_RS00385 | 62910..63416 | - | 507 | WP_001326595 | CaiF/GrlA family transcriptional regulator | - |