T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48059..69992
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KR398_RS00295 (GJFFNDAI_00060) | 43822..44448 | - | 627 | WP_254913868 | RepA family replication protein | - |
| KR398_RS00300 (GJFFNDAI_00061) | 45023..45274 | - | 252 | WP_113394424 | hypothetical protein | - |
| KR398_RS00305 (GJFFNDAI_00062) | 45286..45819 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| KR398_RS00310 (GJFFNDAI_00063) | 45865..48057 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| KR398_RS00315 (GJFFNDAI_00064) | 48059..49180 | - | 1122 | WP_052455213 | thioredoxin fold domain-containing protein | trbB |
| KR398_RS00320 (GJFFNDAI_00065) | 49161..50579 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| KR398_RS00325 (GJFFNDAI_00066) | 50681..51304 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KR398_RS00330 (GJFFNDAI_00067) | 51370..53514 | - | 2145 | WP_032440591 | DotA/TraY family protein | traY |
| KR398_RS00335 (GJFFNDAI_00068) | 53556..54137 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| KR398_RS00340 (GJFFNDAI_00069) | 54134..55330 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| KR398_RS00345 (GJFFNDAI_00070) | 55340..58387 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| KR398_RS00350 (GJFFNDAI_00071) | 58397..58960 | - | 564 | WP_045325070 | hypothetical protein | traT |
| KR398_RS00355 (GJFFNDAI_00072) | 59004..59405 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| KR398_RS00360 (GJFFNDAI_00073) | 59461..59994 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| KR398_RS00365 (GJFFNDAI_00074) | 60004..60723 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| KR398_RS00370 (GJFFNDAI_00075) | 60730..62070 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| KR398_RS00375 (GJFFNDAI_00076) | 62074..63177 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| KR398_RS00380 (GJFFNDAI_00077) | 63188..63856 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| KR398_RS00385 (GJFFNDAI_00078) | 63928..64281 | - | 354 | WP_032440584 | hypothetical protein | traL |
| KR398_RS00390 (GJFFNDAI_00079) | 64315..67728 | - | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| KR398_RS00395 (GJFFNDAI_00080) | 67746..68012 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| KR398_RS00400 (GJFFNDAI_00081) | 68009..69196 | - | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | - |
| KR398_RS00405 (GJFFNDAI_00082) | 69174..69992 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| KR398_RS00410 (GJFFNDAI_00083) | 69989..70453 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| KR398_RS00415 (GJFFNDAI_00084) | 70479..70958 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| KR398_RS00420 (GJFFNDAI_00086) | 71690..71917 | - | 228 | WP_032440573 | hypothetical protein | - |
| KR398_RS00425 (GJFFNDAI_00087) | 72527..73369 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| KR398_RS00430 (GJFFNDAI_00088) | 73444..74358 | + | 915 | WP_223289764 | hypothetical protein | - |
| KR398_RS00435 (GJFFNDAI_00089) | 74441..74845 | + | 405 | WP_223289767 | molybdopterin-dependent oxidoreductase | - |