T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41240..58055
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IFB59_RS00250 | 36485..37138 | - | 654 | WP_000572553 | hypothetical protein | - |
| IFB59_RS00255 | 37205..38329 | - | 1125 | WP_000486716 | site-specific integrase | - |
| IFB59_RS00260 | 38391..38699 | + | 309 | WP_189761508 | pilus assembly protein | - |
| IFB59_RS00265 | 39323..40579 | - | 1257 | WP_189761509 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IFB59_RS00270 | 40592..41236 | - | 645 | WP_189761510 | A24 family peptidase | - |
| IFB59_RS00275 | 41240..41668 | - | 429 | WP_001326801 | lytic transglycosylase domain-containing protein | virB1 |
| IFB59_RS00280 | 41788..42345 | - | 558 | WP_063268646 | type 4 pilus major pilin | - |
| IFB59_RS00285 | 42390..43499 | - | 1110 | WP_063268645 | type II secretion system F family protein | - |
| IFB59_RS00290 | 43490..45028 | - | 1539 | WP_063268644 | ATPase, T2SS/T4P/T4SS family | virB11 |
| IFB59_RS00295 | 45053..45547 | - | 495 | WP_063268643 | type IV pilus biogenesis protein PilP | - |
| IFB59_RS00300 | 45531..46853 | - | 1323 | WP_000454142 | type 4b pilus protein PilO2 | - |
| IFB59_RS00305 | 46892..48535 | - | 1644 | WP_063268642 | PilN family type IVB pilus formation outer membrane protein | - |
| IFB59_RS00310 | 48586..50544 | - | 1959 | WP_172690185 | type IV secretory system conjugative DNA transfer family protein | - |
| IFB59_RS00315 | 50560..51615 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| IFB59_RS00320 | 51634..52773 | - | 1140 | WP_063268640 | TrbI/VirB10 family protein | virB10 |
| IFB59_RS00325 | 52763..53464 | - | 702 | WP_049824867 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| IFB59_RS00330 | 53530..54264 | - | 735 | WP_015057166 | type IV secretion system protein | virB8 |
| IFB59_RS00335 | 54426..56783 | - | 2358 | WP_071940824 | VirB4 family type IV secretion system protein | virb4 |
| IFB59_RS00340 | 56789..57109 | - | 321 | WP_000362081 | VirB3 family type IV secretion system protein | virB3 |
| IFB59_RS00345 | 57180..57470 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| IFB59_RS00425 | 57470..57673 | - | 204 | WP_020806522 | hypothetical protein | - |
| IFB59_RS00350 | 57657..58055 | - | 399 | WP_250998223 | lytic transglycosylase domain-containing protein | virB1 |
| IFB59_RS00355 | 58076..58474 | - | 399 | WP_071940825 | hypothetical protein | - |
| IFB59_RS00360 | 58593..59030 | - | 438 | WP_071940826 | type IV pilus biogenesis protein PilM | - |
| IFB59_RS00365 | 59036..60271 | - | 1236 | WP_071940827 | TcpQ domain-containing protein | - |
| IFB59_RS00370 | 60274..60573 | - | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| IFB59_RS00375 | 60641..60922 | - | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IFB59_RS00380 | 60912..61163 | - | 252 | WP_000121741 | hypothetical protein | - |
| IFB59_RS00385 | 61263..61898 | - | 636 | WP_015059536 | hypothetical protein | - |
| IFB59_RS00390 | 61946..62755 | + | 810 | WP_001005148 | DUF5710 domain-containing protein | - |