T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47133..89313
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6842_RS00295 (G6842_00060) | 44849..47140 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| G6842_RS00300 (G6842_00061) | 47133..48203 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| G6842_RS00305 (G6842_00062) | 48222..49430 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| G6842_RS00310 (G6842_00063) | 49722..49874 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| G6842_RS00315 (G6842_00064) | 49946..50197 | - | 252 | WP_001291964 | hypothetical protein | - |
| G6842_RS00625 | 50696..50791 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| G6842_RS00600 | 50856..51140 | - | 285 | WP_031942457 | hypothetical protein | - |
| G6842_RS00325 (G6842_00066) | 51424..51633 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| G6842_RS00605 (G6842_00067) | 51705..52106 | - | 402 | WP_223873514 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G6842_RS00335 (G6842_00068) | 52430..54598 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| G6842_RS00340 (G6842_00069) | 54695..55279 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| G6842_RS00345 (G6842_00070) | 55308..56510 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| G6842_RS00350 (G6842_00071) | 56477..57091 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| G6842_RS00355 (G6842_00072) | 57091..60135 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| G6842_RS00360 (G6842_00073) | 60225..61025 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| G6842_RS00365 (G6842_00074) | 61009..61197 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| G6842_RS00370 (G6842_00075) | 61261..61665 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| G6842_RS00375 (G6842_00076) | 61716..62243 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| G6842_RS00380 (G6842_00077) | 62243..62947 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| G6842_RS00385 (G6842_00078) | 62947..64236 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| G6842_RS00390 (G6842_00079) | 64239..65222 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| G6842_RS00395 (G6842_00080) | 65233..65925 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| G6842_RS00400 (G6842_00081) | 65922..66269 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| G6842_RS00405 (G6842_00082) | 66287..70054 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| G6842_RS00410 (G6842_00083) | 70144..70695 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| G6842_RS00415 (G6842_00084) | 70710..71000 | - | 291 | WP_001299214 | hypothetical protein | traK |
| G6842_RS00420 (G6842_00085) | 70997..72145 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| G6842_RS00425 (G6842_00086) | 72142..72960 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| G6842_RS00430 (G6842_00087) | 72957..73415 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| G6842_RS00435 (G6842_00088) | 73810..74394 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| G6842_RS00440 (G6842_00089) | 74454..75656 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| G6842_RS00445 (G6842_00090) | 75741..76565 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| G6842_RS00450 (G6842_00091) | 76716..77870 | - | 1155 | WP_001139957 | site-specific integrase | - |
| G6842_RS00455 | 77869..78186 | + | 318 | WP_001558195 | hypothetical protein | - |
| G6842_RS00610 | 78183..78338 | - | 156 | WP_001302705 | hypothetical protein | - |
| G6842_RS00460 (G6842_00092) | 78664..79926 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| G6842_RS00465 (G6842_00093) | 80133..81113 | - | 981 | WP_000019441 | IS5-like element ISKpn26 family transposase | - |
| G6842_RS00470 (G6842_00094) | 81414..82289 | + | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| G6842_RS00475 (G6842_00095) | 82336..82680 | - | 345 | Protein_96 | WbuC family cupin fold metalloprotein | - |
| G6842_RS00615 | 82680..82889 | + | 210 | Protein_97 | hypothetical protein | - |
| G6842_RS00620 | 83270..83518 | + | 249 | WP_001349157 | hypothetical protein | - |
| G6842_RS00480 (G6842_00096) | 83515..84807 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| G6842_RS00485 (G6842_00097) | 84807..85463 | - | 657 | WP_001193553 | prepilin peptidase | - |
| G6842_RS00490 (G6842_00098) | 85448..86008 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| G6842_RS00495 (G6842_00099) | 86018..86632 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| G6842_RS00500 (G6842_00100) | 86650..87747 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| G6842_RS00505 (G6842_00101) | 87760..89313 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| G6842_RS00510 (G6842_00102) | 89324..89776 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| G6842_RS00515 (G6842_00103) | 89763..91058 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| G6842_RS00520 (G6842_00104) | 91051..92733 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| G6842_RS00525 (G6842_00105) | 92747..93184 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| G6842_RS00530 (G6842_00106) | 93184..94252 | - | 1069 | Protein_109 | type IV pilus biogenesis lipoprotein PilL | - |