T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 10235..51211
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6840_RS00060 (G6840_00010) | 7951..10242 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| G6840_RS00065 (G6840_00011) | 10235..11305 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| G6840_RS00070 (G6840_00012) | 11324..12532 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| G6840_RS00075 (G6840_00013) | 12824..12976 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| G6840_RS00080 (G6840_00014) | 13048..13299 | - | 252 | WP_001291964 | hypothetical protein | - |
| G6840_RS00380 | 13797..13892 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| G6840_RS00085 | 13957..14241 | - | 285 | WP_031942457 | hypothetical protein | - |
| G6840_RS00090 (G6840_00016) | 14525..14734 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| G6840_RS00095 (G6840_00017) | 14806..15480 | - | 675 | WP_223866377 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G6840_RS00100 (G6840_00018) | 15530..17698 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| G6840_RS00105 (G6840_00019) | 17795..18379 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| G6840_RS00110 (G6840_00020) | 18408..19610 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| G6840_RS00115 (G6840_00021) | 19577..20191 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| G6840_RS00120 (G6840_00022) | 20191..23235 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| G6840_RS00125 (G6840_00023) | 23325..24125 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| G6840_RS00130 | 24109..24296 | - | 188 | Protein_26 | putative conjugal transfer protein TraS | - |
| G6840_RS00135 (G6840_00024) | 24360..24763 | - | 404 | Protein_27 | IncI1-type conjugal transfer protein TraR | - |
| G6840_RS00140 (G6840_00025) | 24814..25341 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| G6840_RS00145 (G6840_00026) | 25341..26045 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| G6840_RS00150 (G6840_00027) | 26045..27334 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| G6840_RS00155 (G6840_00028) | 27337..28320 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| G6840_RS00160 (G6840_00029) | 28331..29023 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| G6840_RS00165 (G6840_00030) | 29020..29367 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| G6840_RS00170 (G6840_00031) | 29385..33152 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| G6840_RS00175 (G6840_00032) | 33241..33792 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| G6840_RS00180 (G6840_00033) | 33807..34097 | - | 291 | WP_001299214 | hypothetical protein | traK |
| G6840_RS00185 (G6840_00034) | 34094..35243 | - | 1150 | Protein_37 | plasmid transfer ATPase TraJ | - |
| G6840_RS00195 (G6840_00036) | 35240..36058 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| G6840_RS00200 (G6840_00037) | 36055..36513 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| G6840_RS00205 (G6840_00038) | 36908..37492 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| G6840_RS00210 (G6840_00039) | 37552..38754 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| G6840_RS00215 (G6840_00040) | 38839..39663 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| G6840_RS00220 (G6840_00041) | 39814..40968 | - | 1155 | WP_001139957 | site-specific integrase | - |
| G6840_RS00370 | 40952..41251 | + | 300 | WP_223873359 | pilus assembly protein PilV | - |
| G6840_RS00375 | 41787..41996 | - | 210 | Protein_45 | hypothetical protein | - |
| G6840_RS00230 (G6840_00043) | 41996..42340 | + | 345 | Protein_46 | WbuC family cupin fold metalloprotein | - |
| G6840_RS00235 (G6840_00044) | 42387..43262 | - | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| G6840_RS00240 (G6840_00045) | 43550..44812 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| G6840_RS00390 | 45042..45284 | + | 243 | Protein_49 | prepilin | - |
| G6840_RS00250 (G6840_00046) | 45281..46705 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| G6840_RS00255 (G6840_00047) | 46705..47361 | - | 657 | WP_001193553 | prepilin peptidase | - |
| G6840_RS00260 (G6840_00048) | 47346..47906 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| G6840_RS00265 (G6840_00049) | 47916..48530 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| G6840_RS00270 (G6840_00050) | 48548..49645 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| G6840_RS00275 (G6840_00051) | 49658..51211 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| G6840_RS00280 (G6840_00052) | 51222..51674 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| G6840_RS00285 (G6840_00054) | 51661..52955 | - | 1295 | Protein_57 | type 4b pilus protein PilO2 | - |
| G6840_RS00290 (G6840_00055) | 52948..54606 | - | 1659 | WP_001324592 | PilN family type IVB pilus formation outer membrane protein | - |
| G6840_RS00295 (G6840_00056) | 54643..55080 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| G6840_RS00300 | 55080..56168 | - | 1089 | WP_031619449 | type IV pilus biogenesis lipoprotein PilL | - |