T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2395..13017
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS872_RS00005 (PI2_p01) | 1..1221 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| HS872_RS00010 (PI2_p02) | 1268..1609 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| HS872_RS00015 (PI2_p03) | 1723..2085 | + | 363 | WP_011114045 | transcriptional regulator | - |
| HS872_RS00020 (PI2_p04) | 2395..3357 | + | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| HS872_RS00025 (PI2_p05) | 3374..3838 | + | 465 | WP_014386436 | conjugal transfer system pilin TrbC | virB2 |
| HS872_RS00030 (PI2_p06) | 3842..4153 | + | 312 | WP_011013263 | conjugal transfer protein TrbD | virB3 |
| HS872_RS00035 (PI2_p07) | 4150..6708 | + | 2559 | WP_014386438 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS872_RS00040 (PI2_p08) | 6705..7493 | + | 789 | WP_011013265 | conjugal transfer protein TrbF | virB8 |
| HS872_RS00045 (PI2_p09) | 7511..8404 | + | 894 | WP_014386236 | P-type conjugative transfer protein TrbG | virB9 |
| HS872_RS00050 (PI2_p10) | 8407..8868 | + | 462 | WP_011013267 | lipoprotein | - |
| HS872_RS00055 (PI2_p11) | 8872..10251 | + | 1380 | WP_012478192 | TrbI/VirB10 family protein | virB10 |
| HS872_RS00060 (PI2_p12) | 10268..11041 | + | 774 | WP_011255135 | P-type conjugative transfer protein TrbJ | virB5 |
| HS872_RS00065 (PI2_p13) | 11051..11272 | + | 222 | WP_011255136 | entry exclusion lipoprotein TrbK | - |
| HS872_RS00070 (PI2_p14) | 11284..13017 | + | 1734 | WP_014386439 | P-type conjugative transfer protein TrbL | virB6 |
| HS872_RS00075 (PI2_p15) | 13036..13614 | + | 579 | WP_011255138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS872_RS00080 (PI2_p16) | 13616..14251 | + | 636 | WP_014386440 | TrbN | - |
| HS872_RS00085 (PI2_p17) | 14281..14550 | + | 270 | WP_011255140 | hypothetical protein | - |
| HS872_RS00090 (PI2_p18) | 14547..15245 | + | 699 | WP_012478194 | TraX family protein | - |
| HS872_RS00095 (PI2_p19) | 15320..15703 | + | 384 | WP_014386441 | OmpA family protein | - |
| HS872_RS00100 (PI2_p20) | 15806..16222 | + | 417 | WP_012478195 | hypothetical protein | - |