T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 82765..111608
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTW79_RS00475 (NCLADELE_00093) | 82765..84981 | - | 2217 | WP_023356304 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTW79_RS00480 (NCLADELE_00094) | 84978..85757 | - | 780 | WP_000199914 | hypothetical protein | - |
| HTW79_RS00485 (NCLADELE_00095) | 85960..86691 | - | 732 | WP_000850429 | conjugal transfer complement resistance protein TraT | - |
| HTW79_RS00490 (NCLADELE_00096) | 86723..87220 | - | 498 | WP_000605862 | entry exclusion protein | - |
| HTW79_RS00495 (NCLADELE_00097) | 87239..90058 | - | 2820 | WP_001007062 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTW79_RS00500 (NCLADELE_00098) | 90055..91428 | - | 1374 | WP_000944328 | conjugal transfer pilus assembly protein TraH | traH |
| HTW79_RS00505 | 91415..91807 | - | 393 | WP_000659962 | F-type conjugal transfer protein TrbF | - |
| HTW79_RS00510 | 91788..92135 | - | 348 | WP_071571857 | P-type conjugative transfer protein TrbJ | - |
| HTW79_RS00515 | 92065..92610 | - | 546 | WP_000059829 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTW79_RS00520 | 92597..92881 | - | 285 | WP_001617873 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTW79_RS00525 (NCLADELE_00099) | 93008..93328 | - | 321 | WP_001348757 | conjugal transfer protein TrbA | - |
| HTW79_RS00535 (NCLADELE_00104) | 94228..95208 | - | 981 | WP_000019450 | IS5-like element ISKpn26 family transposase | - |
| HTW79_RS00540 (NCLADELE_00105) | 95338..96081 | - | 744 | WP_001030401 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTW79_RS00545 (NCLADELE_00106) | 96074..96331 | - | 258 | WP_000864347 | conjugal transfer protein TrbE | - |
| HTW79_RS00550 (NCLADELE_00107) | 96358..98208 | - | 1851 | WP_000821866 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTW79_RS00555 (NCLADELE_00108) | 98205..98843 | - | 639 | WP_001080259 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTW79_RS00560 (NCLADELE_00109) | 98852..99157 | - | 306 | WP_000224413 | hypothetical protein | - |
| HTW79_RS00565 (NCLADELE_00110) | 99187..100179 | - | 993 | WP_000830190 | conjugal transfer pilus assembly protein TraU | traU |
| HTW79_RS00570 (NCLADELE_00111) | 100176..100808 | - | 633 | WP_001203727 | type-F conjugative transfer system protein TraW | traW |
| HTW79_RS00575 (NCLADELE_00112) | 100805..101191 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HTW79_RS00580 (NCLADELE_00113) | 101188..103815 | - | 2628 | WP_001064258 | type IV secretion system protein TraC | virb4 |
| HTW79_RS00585 (NCLADELE_00115) | 103975..104196 | - | 222 | WP_001278694 | conjugal transfer protein TraR | - |
| HTW79_RS00590 (NCLADELE_00116) | 104331..104846 | - | 516 | WP_000809886 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTW79_RS00595 (NCLADELE_00100) | 104846..105157 | - | 312 | WP_001057272 | conjugal transfer protein TrbD | - |
| HTW79_RS00600 (NCLADELE_00118) | 105144..105710 | - | 567 | WP_000896601 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTW79_RS00605 (NCLADELE_00119) | 105700..107151 | - | 1452 | WP_000146687 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTW79_RS00610 (NCLADELE_00120) | 107151..107879 | - | 729 | WP_001230808 | type-F conjugative transfer system secretin TraK | traK |
| HTW79_RS00615 (NCLADELE_00121) | 107866..108432 | - | 567 | WP_000399791 | type IV conjugative transfer system protein TraE | traE |
| HTW79_RS00620 (NCLADELE_00122) | 108454..108765 | - | 312 | WP_000012107 | type IV conjugative transfer system protein TraL | traL |
| HTW79_RS00625 (NCLADELE_00123) | 108770..109132 | - | 363 | WP_000338606 | type IV conjugative transfer system pilin TraA | - |
| HTW79_RS00630 (NCLADELE_00124) | 109166..109393 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| HTW79_RS00635 (NCLADELE_00125) | 109481..110158 | - | 678 | WP_001348626 | PAS domain-containing protein | - |
| HTW79_RS00640 (NCLADELE_00126) | 110292..110675 | - | 384 | WP_172694660 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTW79_RS00645 (NCLADELE_00127) | 111006..111608 | + | 603 | WP_000243712 | transglycosylase SLT domain-containing protein | virB1 |
| HTW79_RS00650 (NCLADELE_00128) | 111905..112726 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| HTW79_RS00655 (NCLADELE_00129) | 112845..113132 | - | 288 | WP_000107535 | hypothetical protein | - |
| HTW79_RS00660 | 113157..113363 | - | 207 | WP_000275859 | hypothetical protein | - |
| HTW79_RS00960 | 113433..113606 | + | 174 | Protein_134 | hypothetical protein | - |
| HTW79_RS00965 | 113604..113834 | - | 231 | WP_001426396 | hypothetical protein | - |
| HTW79_RS00670 (NCLADELE_00130) | 114054..114179 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HTW79_RS00970 (NCLADELE_00130) | 114121..114270 | - | 150 | Protein_137 | plasmid maintenance protein Mok | - |