T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43960..53050
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTW78_RS00320 | 39991..40224 | - | 234 | WP_001191890 | hypothetical protein | - |
| HTW78_RS00325 | 40206..40823 | - | 618 | WP_001249395 | hypothetical protein | - |
| HTW78_RS00330 | 40991..43963 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HTW78_RS00335 | 43960..45825 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HTW78_RS00340 | 45836..46420 | + | 585 | WP_000332868 | hypothetical protein | - |
| HTW78_RS00345 | 46377..47006 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HTW78_RS00350 | 47016..47462 | + | 447 | WP_000122507 | hypothetical protein | - |
| HTW78_RS00355 | 47472..47849 | + | 378 | WP_000869297 | hypothetical protein | - |
| HTW78_RS00360 | 47849..48511 | + | 663 | WP_001231464 | hypothetical protein | - |
| HTW78_RS00365 | 48692..48835 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTW78_RS00370 | 48847..49212 | + | 366 | WP_001052530 | hypothetical protein | - |
| HTW78_RS00375 | 49357..49638 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTW78_RS00380 | 49635..50261 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTW78_RS00385 | 50245..51162 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTW78_RS00390 | 51162..52475 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTW78_RS00395 | 52472..53050 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTW78_RS00400 | 53054..53446 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTW78_RS00405 | 53731..54993 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HTW78_RS00410 | 55317..56462 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HTW78_RS00415 | 56556..57089 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HTW78_RS00420 | 57086..57403 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HTW78_RS00425 | 57660..58025 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |